Coordinate-aware organelle record

Clerodendrum trichotomum chloroplast genome

Available NC_057680.1 151,549 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	12	86	74
psbA	gene	photosystem-ii	−	400	1459	1059
trnK-UUU	gene	translation-rna	−	1674	4259	2585
matK	gene	other	−	1982	3518	1536
rps16	gene	ribosomal-protein	−	4887	6055	1168
trnQ-UUG	gene	translation-rna	−	7240	7312	72
psbK	gene	photosystem-ii	+	7675	7861	186
psbI	gene	photosystem-ii	+	8270	8381	111
trnS	gene	translation-rna	+	8497	8585	88
trnG-UCC	gene	translation-rna	+	9230	9997	767
trnR-UCU	gene	translation-rna	+	10181	10253	72
atpA	gene	atp-synthase	−	10357	11881	1524
atpF	gene	atp-synthase	−	11985	13213	1228
atpH	gene	atp-synthase	−	13591	13837	246
atpI	gene	atp-synthase	−	14863	15607	744
rps2	gene	ribosomal-protein	−	15772	16483	711
rpoC2	gene	rna-polymerase	−	16675	20860	4185
rpoC1	gene	rna-polymerase	−	21026	23847	2821
rpoB	gene	rna-polymerase	−	23873	27086	3213
trnC-GCA	gene	translation-rna	+	28298	28369	71
petN	gene	cytochrome	+	28953	29043	90
psbM	gene	photosystem-ii	−	29831	29936	105
trnD-GUC	gene	translation-rna	−	30457	30531	74
trnY-GUA	gene	translation-rna	−	30648	30732	84
trnE-UUC	gene	translation-rna	−	30798	30871	73
trnT-GGU	gene	translation-rna	+	31425	31497	72
psbD	gene	photosystem-ii	+	32657	33719	1062
psbC	gene	photosystem-ii	+	33666	35088	1422
trnS-UGA	gene	translation-rna	−	35348	35441	93
psbZ	gene	photosystem-ii	+	35767	35956	189
trnG-GCC	gene	translation-rna	+	36174	36245	71
trnM-CAU	gene	translation-rna	−	36426	36500	74
rps14	gene	ribosomal-protein	−	36644	36947	303
psaB	gene	photosystem-i	−	37069	39274	2205
psaA	gene	photosystem-i	−	39299	41552	2253
ycf3	gene	other	−	42247	44184	1937
trnS-GGA	gene	translation-rna	+	44858	44945	87
rps4	gene	ribosomal-protein	−	45251	45857	606
trnT-UGU	gene	translation-rna	−	46228	46301	73
trnL	gene	translation-rna	+	46973	47543	570
trnF	gene	translation-rna	+	48092	48174	82
ndhJ	gene	nad-dehydrogenase	−	48531	49008	477
ndhK	gene	nad-dehydrogenase	−	49108	49786	678
ndhC	gene	nad-dehydrogenase	−	49841	50204	363
trnV	gene	translation-rna	−	51041	51705	664
trnM-CAU	gene	translation-rna	+	51885	51958	73
atpE	gene	atp-synthase	−	52174	52576	402
atpB	gene	atp-synthase	−	52572	54069	1497
rbcL	gene	other	+	54858	56298	1440
accD	gene	other	+	57005	58487	1482
psaI	gene	photosystem-i	+	59092	59203	111
ycf4	gene	other	+	59624	60179	555
cemA	gene	other	+	60835	61525	690
petA	gene	cytochrome	+	61719	62682	963
psbJ	gene	photosystem-ii	−	63582	63705	123
psbL	gene	photosystem-ii	−	63838	63955	117
psbF	gene	photosystem-ii	−	63978	64098	120
psbE	gene	photosystem-ii	−	64112	64364	252
petL	gene	cytochrome	+	65277	65373	96
petG	gene	cytochrome	+	65555	65669	114
trnW-CCA	gene	translation-rna	−	65791	65865	74
trnP-UGG	gene	translation-rna	−	66027	66101	74
psaJ	gene	photosystem-i	+	66388	66523	135
rpl33	gene	ribosomal-protein	+	66993	67194	201
rps18	gene	ribosomal-protein	+	67360	67666	306
rpl20	gene	ribosomal-protein	−	67734	68142	408
rps12	gene	ribosomal-protein	−	68973	97136	28163
rps12	gene	ribosomal-protein	+	68973	138275	69302
clpP	gene	other	−	69226	71174	1948
psbB	gene	photosystem-ii	+	71585	73112	1527
psbT	gene	photosystem-ii	+	73289	73397	108
psbN	gene	photosystem-ii	−	73457	73589	132
psbH	gene	photosystem-ii	+	73694	73916	222
petB	gene	cytochrome	+	74037	75414	1377
petD	gene	cytochrome	+	75602	76820	1218
rpoA	gene	rna-polymerase	−	77002	78016	1014
rps11	gene	ribosomal-protein	−	78097	78514	417
rpl36	gene	ribosomal-protein	−	78615	78729	114
infA	gene	other	−	78824	79058	234
rps8	gene	ribosomal-protein	−	79183	79588	405
rpl14	gene	ribosomal-protein	−	79748	80117	369
rpl16	gene	ribosomal-protein	−	80233	81488	1255
rps3	gene	ribosomal-protein	−	81647	82304	657
rpl22	gene	ribosomal-protein	−	82288	82756	468
rps19	gene	ribosomal-protein	−	82811	83090	279
rpl2	gene	ribosomal-protein	−	83143	84635	1492
rpl23	gene	ribosomal-protein	−	84653	84935	282
trnI-CAU	gene	translation-rna	−	85100	85174	74
ycf2	gene	other	+	85262	92096	6834
trnL-CAA	gene	translation-rna	−	92702	92783	81
ndhB	gene	nad-dehydrogenase	−	93332	95544	2212
rps7	gene	ribosomal-protein	−	95818	96286	468
trnV-GAC	gene	translation-rna	+	98708	98780	72
rrn16S	gene	ribosomal-rna	+	99007	100498	1491
trnI	gene	translation-rna	+	100795	101817	1022
trnA	gene	translation-rna	+	101881	102761	880
rrn23S	gene	ribosomal-rna	+	102922	105732	2810
rrn4.5S	gene	ribosomal-rna	+	105830	105933	103
rrn5S	gene	ribosomal-rna	+	106184	106305	121
trnR-ACG	gene	translation-rna	+	106546	106620	74
trnN-GUU	gene	translation-rna	−	107183	107255	72
ycf1	gene	other	+	107593	108703	1110
ndhF	gene	nad-dehydrogenase	−	108699	110925	2226
rpl32	gene	ribosomal-protein	+	111468	111645	177
trnL-UAG	gene	translation-rna	+	112104	112184	80
ccsA	gene	other	+	112289	113255	966
ndhD	gene	nad-dehydrogenase	−	113499	115029	1530
psaC	gene	photosystem-i	−	115129	115375	246
ndhE	gene	nad-dehydrogenase	−	115625	115931	306
ndhG	gene	nad-dehydrogenase	−	116141	116672	531
ndhI	gene	nad-dehydrogenase	−	117023	117530	507
ndhA	gene	nad-dehydrogenase	−	117610	119615	2005
ndhH	gene	nad-dehydrogenase	−	119616	120798	1182
rps15	gene	ribosomal-protein	−	120894	121167	273
ycf1	gene	other	−	121531	127021	5490
trnN-GUU	gene	translation-rna	+	127359	127431	72
trnR-ACG	gene	translation-rna	−	127994	128068	74
rrn5S	gene	ribosomal-rna	−	128309	128430	121
rrn4.5S	gene	ribosomal-rna	−	128681	128784	103
K8L63_pgr002	gene	other	−	128882	131692	2810
trnA	gene	translation-rna	−	131853	132734	881
trnI	gene	translation-rna	−	132797	133819	1022
K8L63_pgr001	gene	other	−	134116	135607	1491
trnV-GAC	gene	translation-rna	−	135834	135906	72
rps7	gene	ribosomal-protein	+	138328	138796	468
ndhB	gene	nad-dehydrogenase	+	139070	141282	2212
trnL-CAA	gene	translation-rna	+	141831	141912	81
ycf2	gene	other	−	142518	149352	6834
trnI-CAU	gene	translation-rna	+	149440	149514	74
rpl23	gene	ribosomal-protein	+	149679	149961	282
rpl2	gene	ribosomal-protein	+	149979	151471	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_057680.1DNA · accDNC_057680DNA · atpBNC_057680DNA · matKNC_057680DNA · ndhFNC_057680DNA · psbANC_057680DNA · rbcLNC_057680DNA · rps12NC_057680DNA · ycf1NC_057680