Coleus hadiensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_069583.1 · 11–84 bp · −
psbA · NC_069583.1 · 396–1,454 bp · −
trnK-UUU · NC_069583.1 · 1,685–4,266 bp · −
matK · NC_069583.1 · 2,005–3,525 bp · −
rps16 · NC_069583.1 · 4,794–5,929 bp · −
trnQ-UUG · NC_069583.1 · 6,959–7,030 bp · −
trnS-GCU · NC_069583.1 · 8,235–8,322 bp · −
atpA · NC_069583.1 · 10,182–11,705 bp · −
atpF · NC_069583.1 · 11,802–13,058 bp · −
atpH · NC_069583.1 · 13,342–13,587 bp · −
atpI · NC_069583.1 · 14,572–15,315 bp · −
rps2 · NC_069583.1 · 15,542–16,252 bp · −
rpoC2 · NC_069583.1 · 16,464–20,633 bp · −
rpoC1 · NC_069583.1 · 20,798–23,621 bp · −
rpoB · NC_069583.1 · 23,648–26,860 bp · −
psbM · NC_069583.1 · 29,395–29,499 bp · −
trnD-GUC · NC_069583.1 · 30,012–30,085 bp · −
trnY-GUA · NC_069583.1 · 30,196–30,279 bp · −
trnE-UUC · NC_069583.1 · 30,357–30,429 bp · −
trnS-UGA · NC_069583.1 · 35,083–35,175 bp · −
trnM-CAU · NC_069583.1 · 36,180–36,253 bp · −
rps14 · NC_069583.1 · 36,398–36,700 bp · −
psaB · NC_069583.1 · 36,823–39,027 bp · −
psaA · NC_069583.1 · 39,053–41,305 bp · −
ycf3 · NC_069583.1 · 42,067–44,026 bp · −
rps4 · NC_069583.1 · 45,266–45,871 bp · −
trnT-UGU · NC_069583.1 · 46,244–46,316 bp · −
ndhJ · NC_069583.1 · 48,612–49,088 bp · −
ndhK · NC_069583.1 · 49,199–49,876 bp · −
ndhC · NC_069583.1 · 49,928–50,290 bp · −
atpE · NC_069583.1 · 52,291–52,692 bp · −
atpB · NC_069583.1 · 52,689–54,185 bp · −
psbJ · NC_069583.1 · 63,936–64,058 bp · −
psbL · NC_069583.1 · 64,193–64,309 bp · −
psbF · NC_069583.1 · 64,333–64,452 bp · −
psbE · NC_069583.1 · 64,467–64,718 bp · −
trnW-CCA · NC_069583.1 · 66,111–66,184 bp · −
trnP-UGG · NC_069583.1 · 66,352–66,425 bp · −
rpl20 · NC_069583.1 · 68,202–68,588 bp · −
rps12 · NC_069583.1 · 69,314–69,427 bp · −
rps12 · NC_069583.1 · 96,685–97,478 bp · −
clpP · NC_069583.1 · 69,546–71,463 bp · −
psbN · NC_069583.1 · 73,804–73,935 bp · −
rpoA · NC_069583.1 · 77,302–78,309 bp · −
rps11 · NC_069583.1 · 78,381–78,797 bp · −
rpl36 · NC_069583.1 · 78,907–79,020 bp · −
infA · NC_069583.1 · 79,116–79,349 bp · −
rps8 · NC_069583.1 · 79,477–79,881 bp · −
rpl14 · NC_069583.1 · 80,053–80,421 bp · −
rpl16 · NC_069583.1 · 80,553–81,811 bp · −
rps3 · NC_069583.1 · 81,955–82,617 bp · −
rpl22 · NC_069583.1 · 82,602–83,075 bp · −
rps19 · NC_069583.1 · 83,145–83,423 bp · −
rpl2 · NC_069583.1 · 83,491–84,969 bp · −
rpl23 · NC_069583.1 · 84,988–85,269 bp · −
trnM-CAU · NC_069583.1 · 85,435–85,508 bp · −
trnL-CAA · NC_069583.1 · 93,030–93,110 bp · −
ndhB · NC_069583.1 · 93,686–95,893 bp · −
rps7 · NC_069583.1 · 96,164–96,631 bp · −
trnN-GUU · NC_069583.1 · 107,611–107,682 bp · −
ndhF · NC_069583.1 · 109,048–111,279 bp · −
ndhD · NC_069583.1 · 114,059–115,588 bp · −
psaC · NC_069583.1 · 115,679–115,924 bp · −
ndhE · NC_069583.1 · 116,180–116,485 bp · −
ndhG · NC_069583.1 · 116,694–117,224 bp · −
ndhI · NC_069583.1 · 117,595–118,101 bp · −
ndhA · NC_069583.1 · 118,177–120,295 bp · −
ndhH · NC_069583.1 · 120,297–121,478 bp · −
rps15 · NC_069583.1 · 121,593–121,865 bp · −
ycf1 · NC_069583.1 · 122,277–127,841 bp · −
trnR-ACG · NC_069583.1 · 128,832–128,905 bp · −
rrn5S · NC_069583.1 · 129,149–129,269 bp · −
rrn4.5S · NC_069583.1 · 129,525–129,627 bp · −
rrn23S · NC_069583.1 · 129,726–132,536 bp · −
trnA-UGC · NC_069583.1 · 132,690–133,567 bp · −
trnI · NC_069583.1 · 133,632–134,652 bp · −
rrn16S · NC_069583.1 · 134,950–136,440 bp · −
trnV-GAC · NC_069583.1 · 136,667–136,738 bp · −
ycf15 · NC_069583.1 · 143,096–143,293 bp · −
ycf2 · NC_069583.1 · 143,435–150,262 bp · −
psbK · NC_069583.1 · 7,382–7,567 bp · +
psbI · NC_069583.1 · 7,963–8,073 bp · +
trnT-CGU · NC_069583.1 · 9,065–9,821 bp · +
trnR-UCU · NC_069583.1 · 10,007–10,078 bp · +
trnC-GCA · NC_069583.1 · 28,060–28,130 bp · +
petN · NC_069583.1 · 28,293–28,382 bp · +
trnT-GGU · NC_069583.1 · 31,044–31,115 bp · +
psbD · NC_069583.1 · 32,416–33,477 bp · +
psbC · NC_069583.1 · 33,425–34,846 bp · +
psbZ · NC_069583.1 · 35,500–35,688 bp · +
trnG-GCC · NC_069583.1 · 35,933–36,003 bp · +
trnS-GGA · NC_069583.1 · 44,895–44,981 bp · +
trnL-UAA · NC_069583.1 · 47,004–47,565 bp · +
trnF-GAA · NC_069583.1 · 47,864–47,936 bp · +
trnM-CAU · NC_069583.1 · 52,010–52,082 bp · +
rbcL · NC_069583.1 · 54,976–56,421 bp · +
accD · NC_069583.1 · 57,104–58,579 bp · +
psaI · NC_069583.1 · 59,310–59,420 bp · +
ycf4 · NC_069583.1 · 59,865–60,419 bp · +
cemA · NC_069583.1 · 61,073–61,762 bp · +
petA · NC_069583.1 · 61,972–62,934 bp · +
petL · NC_069583.1 · 65,605–65,700 bp · +
petG · NC_069583.1 · 65,875–65,988 bp · +
psaJ · NC_069583.1 · 66,714–66,848 bp · +
rpl33 · NC_069583.1 · 67,302–67,502 bp · +
rps18 · NC_069583.1 · 67,662–67,967 bp · +
rps12 · NC_069583.1 · 138,387–139,180 bp · +
psbB · NC_069583.1 · 71,936–73,462 bp · +
psbT · NC_069583.1 · 73,637–73,738 bp · +
psbH · NC_069583.1 · 74,041–74,259 bp · +
petB · NC_069583.1 · 74,393–75,747 bp · +
petD · NC_069583.1 · 75,943–77,125 bp · +
ycf2 · NC_069583.1 · 85,603–92,430 bp · +
ycf15 · NC_069583.1 · 92,572–92,769 bp · +
trnV-GAC · NC_069583.1 · 99,127–99,198 bp · +
rrn16S · NC_069583.1 · 99,425–100,915 bp · +
trnI · NC_069583.1 · 101,213–102,233 bp · +
trnA-UGC · NC_069583.1 · 102,298–103,175 bp · +
rrn23S · NC_069583.1 · 103,329–106,139 bp · +
rrn4.5S · NC_069583.1 · 106,238–106,340 bp · +
rrn5S · NC_069583.1 · 106,596–106,716 bp · +
trnR-ACG · NC_069583.1 · 106,960–107,033 bp · +
rpl32 · NC_069583.1 · 111,756–111,920 bp · +
trnL-UAG · NC_069583.1 · 112,684–112,763 bp · +
ccsA · NC_069583.1 · 112,858–113,823 bp · +
trnN-GUU · NC_069583.1 · 128,183–128,254 bp · +
rps7 · NC_069583.1 · 139,234–139,701 bp · +
ndhB · NC_069583.1 · 139,972–142,179 bp · +
trnL-CAA · NC_069583.1 · 142,755–142,835 bp · +
trnM-CAU · NC_069583.1 · 150,357–150,430 bp · +
rpl23 · NC_069583.1 · 150,596–150,877 bp · +
rpl2 · NC_069583.1 · 150,896–152,374 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Coleus hadiensis
ANNOTATED PLASTOME
NC_069583.1
152,484 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38121 76242 114363 152484 bp
Forward strand 5′ → 3′
psbK psbI trnT-CGU trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 396 1454 1059 Locate
trnK-UUU gene − 1685 4266 2582 Locate
matK gene − 2005 3525 1521 Locate
rps16 gene − 4794 5929 1136 Locate
trnQ-UUG gene − 6959 7030 72 Locate
psbK gene + 7382 7567 186 Locate
psbI gene + 7963 8073 111 Locate
trnS-GCU gene − 8235 8322 88 Locate
trnT-CGU gene + 9065 9821 757 Locate
trnR-UCU gene + 10007 10078 72 Locate
atpA gene − 10182 11705 1524 Locate
atpF gene − 11802 13058 1257 Locate
atpH gene − 13342 13587 246 Locate
atpI gene − 14572 15315 744 Locate
rps2 gene − 15542 16252 711 Locate
rpoC2 gene − 16464 20633 4170 Locate
rpoC1 gene − 20798 23621 2824 Locate
rpoB gene − 23648 26860 3213 Locate
trnC-GCA gene + 28060 28130 71 Locate
petN gene + 28293 28382 90 Locate
psbM gene − 29395 29499 105 Locate
trnD-GUC gene − 30012 30085 74 Locate
trnY-GUA gene − 30196 30279 84 Locate
trnE-UUC gene − 30357 30429 73 Locate
trnT-GGU gene + 31044 31115 72 Locate
psbD gene + 32416 33477 1062 Locate
psbC gene + 33425 34846 1422 Locate
trnS-UGA gene − 35083 35175 93 Locate
psbZ gene + 35500 35688 189 Locate
trnG-GCC gene + 35933 36003 71 Locate
trnM-CAU gene − 36180 36253 74 Locate
rps14 gene − 36398 36700 303 Locate
psaB gene − 36823 39027 2205 Locate
psaA gene − 39053 41305 2253 Locate
ycf3 gene − 42067 44026 1960 Locate
trnS-GGA gene + 44895 44981 87 Locate
rps4 gene − 45266 45871 606 Locate
trnT-UGU gene − 46244 46316 73 Locate
trnL-UAA gene + 47004 47565 562 Locate
trnF-GAA gene + 47864 47936 73 Locate
ndhJ gene − 48612 49088 477 Locate
ndhK gene − 49199 49876 678 Locate
ndhC gene − 49928 50290 363 Locate
trnM-CAU gene + 52010 52082 73 Locate
atpE gene − 52291 52692 402 Locate
atpB gene − 52689 54185 1497 Locate
rbcL gene + 54976 56421 1446 Locate
accD gene + 57104 58579 1476 Locate
psaI gene + 59310 59420 111 Locate
ycf4 gene + 59865 60419 555 Locate
cemA gene + 61073 61762 690 Locate
petA gene + 61972 62934 963 Locate
psbJ gene − 63936 64058 123 Locate
psbL gene − 64193 64309 117 Locate
psbF gene − 64333 64452 120 Locate
psbE gene − 64467 64718 252 Locate
petL gene + 65605 65700 96 Locate
petG gene + 65875 65988 114 Locate
trnW-CCA gene − 66111 66184 74 Locate
trnP-UGG gene − 66352 66425 74 Locate
psaJ gene + 66714 66848 135 Locate
rpl33 gene + 67302 67502 201 Locate
rps18 gene + 67662 67967 306 Locate
rpl20 gene − 68202 68588 387 Locate
rps12 gene − 69314 69427 114 Locate
clpP gene − 69546 71463 1918 Locate
psbB gene + 71936 73462 1527 Locate
psbT gene + 73637 73738 102 Locate
psbN gene − 73804 73935 132 Locate
psbH gene + 74041 74259 219 Locate
petB gene + 74393 75747 1355 Locate
petD gene + 75943 77125 1183 Locate
rpoA gene − 77302 78309 1008 Locate
rps11 gene − 78381 78797 417 Locate
rpl36 gene − 78907 79020 114 Locate
infA gene − 79116 79349 234 Locate
rps8 gene − 79477 79881 405 Locate
rpl14 gene − 80053 80421 369 Locate
rpl16 gene − 80553 81811 1259 Locate
rps3 gene − 81955 82617 663 Locate
rpl22 gene − 82602 83075 474 Locate
rps19 gene − 83145 83423 279 Locate
rpl2 gene − 83491 84969 1479 Locate
rpl23 gene − 84988 85269 282 Locate
trnM-CAU gene − 85435 85508 74 Locate
ycf2 gene + 85603 92430 6828 Locate
ycf15 gene + 92572 92769 198 Locate
trnL-CAA gene − 93030 93110 81 Locate
ndhB gene − 93686 95893 2208 Locate
rps7 gene − 96164 96631 468 Locate
rps12 gene − 96685 97478 794 Locate
trnV-GAC gene + 99127 99198 72 Locate
rrn16S gene + 99425 100915 1491 Locate
trnI gene + 101213 102233 1021 Locate
trnA-UGC gene + 102298 103175 878 Locate
rrn23S gene + 103329 106139 2811 Locate
rrn4.5S gene + 106238 106340 103 Locate
rrn5S gene + 106596 106716 121 Locate
trnR-ACG gene + 106960 107033 74 Locate
trnN-GUU gene − 107611 107682 72 Locate
ndhF gene − 109048 111279 2232 Locate
rpl32 gene + 111756 111920 165 Locate
trnL-UAG gene + 112684 112763 80 Locate
ccsA gene + 112858 113823 966 Locate
ndhD gene − 114059 115588 1530 Locate
psaC gene − 115679 115924 246 Locate
ndhE gene − 116180 116485 306 Locate
ndhG gene − 116694 117224 531 Locate
ndhI gene − 117595 118101 507 Locate
ndhA gene − 118177 120295 2119 Locate
ndhH gene − 120297 121478 1182 Locate
rps15 gene − 121593 121865 273 Locate
ycf1 gene − 122277 127841 5565 Locate
trnN-GUU gene + 128183 128254 72 Locate
trnR-ACG gene − 128832 128905 74 Locate
rrn5S gene − 129149 129269 121 Locate
rrn4.5S gene − 129525 129627 103 Locate
rrn23S gene − 129726 132536 2811 Locate
trnA-UGC gene − 132690 133567 878 Locate
trnI gene − 133632 134652 1021 Locate
rrn16S gene − 134950 136440 1491 Locate
trnV-GAC gene − 136667 136738 72 Locate
rps12 gene + 138387 139180 794 Locate
rps7 gene + 139234 139701 468 Locate
ndhB gene + 139972 142179 2208 Locate
trnL-CAA gene + 142755 142835 81 Locate
ycf15 gene − 143096 143293 198 Locate
ycf2 gene − 143435 150262 6828 Locate
trnM-CAU gene + 150357 150430 74 Locate
rpl23 gene + 150596 150877 282 Locate
rpl2 gene + 150896 152374 1479 Locate
Status Available
Accession NC_069583.1
Length 152,484 bp
GC content 37.7%
Annotated genes 131
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources