Dracocephalum cuspidatum chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_079586.1 · 8–81 bp · −
psbA · NC_079586.1 · 390–1,448 bp · −
trnK-UUU · NC_079586.1 · 1,672–4,270 bp · −
matK · NC_079586.1 · 1,957–3,516 bp · −
rps16 · NC_079586.1 · 4,515–4,736 bp · −
trnQ-UUG · NC_079586.1 · 6,615–6,686 bp · −
trnS-GCU · NC_079586.1 · 7,897–7,984 bp · −
atpA · NC_079586.1 · 9,798–11,321 bp · −
atpF · NC_079586.1 · 11,420–12,675 bp · −
atpH · NC_079586.1 · 12,943–13,188 bp · −
atpI · NC_079586.1 · 13,936–14,679 bp · −
rpoC2 · NC_079586.1 · 15,806–19,984 bp · −
rpoC1 · NC_079586.1 · 20,138–22,943 bp · −
rpoB · NC_079586.1 · 22,970–26,182 bp · −
psbM · NC_079586.1 · 28,428–28,532 bp · −
trnD-GUC · NC_079586.1 · 29,062–29,135 bp · −
trnY-GUA · NC_079586.1 · 29,252–29,335 bp · −
trnE-UUC · NC_079586.1 · 29,411–29,483 bp · −
trnS-UGA · NC_079586.1 · 34,036–34,128 bp · −
trnM-CAU · NC_079586.1 · 35,079–35,152 bp · −
rps14 · NC_079586.1 · 35,302–35,604 bp · −
psaB · NC_079586.1 · 35,732–37,936 bp · −
psaA · NC_079586.1 · 37,962–40,214 bp · −
ycf3 · NC_079586.1 · 40,981–42,929 bp · −
rps4 · NC_079586.1 · 44,163–44,768 bp · −
trnT-UGU · NC_079586.1 · 45,143–45,215 bp · −
ndhJ · NC_079586.1 · 47,471–47,947 bp · −
ndhK · NC_079586.1 · 48,051–48,728 bp · −
ndhC · NC_079586.1 · 48,780–49,142 bp · −
atpE · NC_079586.1 · 51,181–51,582 bp · −
atpB · NC_079586.1 · 51,579–53,069 bp · −
psbJ · NC_079586.1 · 61,931–62,053 bp · −
psbL · NC_079586.1 · 62,193–62,309 bp · −
psbF · NC_079586.1 · 62,333–62,452 bp · −
psbE · NC_079586.1 · 62,467–62,718 bp · −
trnW-CCA · NC_079586.1 · 64,102–64,175 bp · −
trnP-UGG · NC_079586.1 · 64,349–64,422 bp · −
rpl20 · NC_079586.1 · 66,192–66,554 bp · −
rps12 · NC_079586.1 · 67,361–67,486 bp · −
rps12 · NC_079586.1 · 95,317–95,556 bp · −
clpP · NC_079586.1 · 67,617–69,531 bp · −
psbN · NC_079586.1 · 71,849–71,980 bp · −
rpoA · NC_079586.1 · 75,362–76,369 bp · −
rps11 · NC_079586.1 · 76,526–76,825 bp · −
rpl36 · NC_079586.1 · 76,972–77,085 bp · −
infA · NC_079586.1 · 77,181–77,414 bp · −
rps8 · NC_079586.1 · 77,542–77,946 bp · −
rpl14 · NC_079586.1 · 78,124–78,492 bp · −
rpl16 · NC_079586.1 · 78,638–79,048 bp · −
rps3 · NC_079586.1 · 80,108–80,770 bp · −
rpl22 · NC_079586.1 · 80,755–81,222 bp · −
rpl2 · NC_079586.1 · 81,625–83,110 bp · −
rpl23 · NC_079586.1 · 83,129–83,383 bp · −
trnM-CAU · NC_079586.1 · 83,566–83,639 bp · −
trnL-CAA · NC_079586.1 · 91,138–91,218 bp · −
ndhB · NC_079586.1 · 91,779–93,988 bp · −
rps7 · NC_079586.1 · 94,255–94,722 bp · −
trnN-GUU · NC_079586.1 · 105,527–105,598 bp · −
ccsA · NC_079586.1 · 119,585–120,571 bp · −
trnL-UAG · NC_079586.1 · 120,665–120,744 bp · −
ycf1 · NC_079586.1 · 124,284–125,432 bp · −
trnR-ACG · NC_079586.1 · 126,242–126,315 bp · −
rrn5S · NC_079586.1 · 126,564–126,685 bp · −
rrn4.5S · NC_079586.1 · 126,772–127,041 bp · −
rrn23S · NC_079586.1 · 127,141–129,951 bp · −
trnA-UGC · NC_079586.1 · 130,111–130,910 bp · −
trnI · NC_079586.1 · 130,965–131,983 bp · −
rrn16S · NC_079586.1 · 132,282–133,772 bp · −
trnV-GAC · NC_079586.1 · 134,001–134,072 bp · −
ycf15 · NC_079586.1 · 140,397–140,570 bp · −
ycf2 · NC_079586.1 · 140,712–147,521 bp · −
psbK · NC_079586.1 · 7,095–7,280 bp · +
psbI · NC_079586.1 · 7,677–7,787 bp · +
trnT-CGU · NC_079586.1 · 8,684–9,438 bp · +
trnR-UCU · NC_079586.1 · 9,623–9,694 bp · +
trnC-GCA · NC_079586.1 · 27,183–27,253 bp · +
petN · NC_079586.1 · 27,403–27,498 bp · +
trnT-GGU · NC_079586.1 · 30,030–30,101 bp · +
psbD · NC_079586.1 · 31,352–32,413 bp · +
psbC · NC_079586.1 · 32,361–33,782 bp · +
psbZ · NC_079586.1 · 34,462–34,650 bp · +
trnG-GCC · NC_079586.1 · 34,842–34,912 bp · +
trnS-GGA · NC_079586.1 · 43,776–43,862 bp · +
trnL-UAA · NC_079586.1 · 45,914–46,481 bp · +
trnF-GAA · NC_079586.1 · 46,781–46,853 bp · +
trnM-CAU · NC_079586.1 · 50,909–50,981 bp · +
rbcL · NC_079586.1 · 53,831–55,285 bp · +
accD · NC_079586.1 · 55,962–57,023 bp · +
psaI · NC_079586.1 · 57,271–57,381 bp · +
ycf4 · NC_079586.1 · 57,840–58,394 bp · +
cemA · NC_079586.1 · 59,053–59,742 bp · +
petA · NC_079586.1 · 59,956–60,918 bp · +
petL · NC_079586.1 · 63,596–63,691 bp · +
petG · NC_079586.1 · 63,870–63,983 bp · +
psaJ · NC_079586.1 · 64,719–64,853 bp · +
rpl33 · NC_079586.1 · 65,287–65,487 bp · +
rps12 · NC_079586.1 · 135,693–135,932 bp · +
psbB · NC_079586.1 · 69,970–71,496 bp · +
psbT · NC_079586.1 · 71,681–71,788 bp · +
psbH · NC_079586.1 · 72,072–72,311 bp · +
petB · NC_079586.1 · 72,433–73,800 bp · +
petD · NC_079586.1 · 74,661–75,185 bp · +
ycf2 · NC_079586.1 · 83,728–90,537 bp · +
ycf15 · NC_079586.1 · 90,679–90,852 bp · +
trnV-GAC · NC_079586.1 · 97,177–97,248 bp · +
rrn16S · NC_079586.1 · 97,477–98,967 bp · +
trnI · NC_079586.1 · 99,266–100,284 bp · +
trnA-UGC · NC_079586.1 · 100,339–101,138 bp · +
rrn23S · NC_079586.1 · 101,298–104,108 bp · +
rrn4.5S · NC_079586.1 · 104,208–104,477 bp · +
rrn5S · NC_079586.1 · 104,564–104,685 bp · +
trnR-ACG · NC_079586.1 · 104,934–105,007 bp · +
ycf1 · NC_079586.1 · 107,188–111,402 bp · +
rps15 · NC_079586.1 · 111,791–112,063 bp · +
ndhH · NC_079586.1 · 112,163–113,344 bp · +
ndhA · NC_079586.1 · 113,346–115,459 bp · +
ndhI · NC_079586.1 · 115,540–116,031 bp · +
ndhG · NC_079586.1 · 116,153–116,683 bp · +
ndhE · NC_079586.1 · 116,927–117,232 bp · +
psaC · NC_079586.1 · 117,476–117,721 bp · +
ndhD · NC_079586.1 · 117,820–119,349 bp · +
ndhF · NC_079586.1 · 122,088–124,304 bp · +
trnN-GUU · NC_079586.1 · 125,651–125,722 bp · +
rps7 · NC_079586.1 · 136,527–136,994 bp · +
ndhB · NC_079586.1 · 137,261–139,470 bp · +
trnL-CAA · NC_079586.1 · 140,031–140,111 bp · +
trnM-CAU · NC_079586.1 · 147,610–147,683 bp · +
rpl23 · NC_079586.1 · 147,866–148,120 bp · +
rpl2 · NC_079586.1 · 148,139–149,624 bp · +
0 kb
12 kb
24 kb
36 kb
48 kb
60 kb
72 kb
84 kb
96 kb
108 kb
120 kb
132 kb
144 kb
Dracocephalum cuspidatum
ANNOTATED PLASTOME
NC_079586.1
149,678 bp · 128 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37420 74839 112258 149678 bp
Forward strand 5′ → 3′
psbK psbI trnT-CGU trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG ycf1 rps15 ndhH ndhA ndhI ndhG ndhE psaC ndhD ndhF trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ccsA trnL-UAG ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
129 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 8 81 74 Locate
psbA gene − 390 1448 1059 Locate
trnK-UUU gene − 1672 4270 2599 Locate
matK gene − 1957 3516 1560 Locate
rps16 gene − 4515 4736 222 Locate
trnQ-UUG gene − 6615 6686 72 Locate
psbK gene + 7095 7280 186 Locate
psbI gene + 7677 7787 111 Locate
trnS-GCU gene − 7897 7984 88 Locate
trnT-CGU gene + 8684 9438 755 Locate
trnR-UCU gene + 9623 9694 72 Locate
atpA gene − 9798 11321 1524 Locate
atpF gene − 11420 12675 1256 Locate
atpH gene − 12943 13188 246 Locate
atpI gene − 13936 14679 744 Locate
rpoC2 gene − 15806 19984 4179 Locate
rpoC1 gene − 20138 22943 2806 Locate
rpoB gene − 22970 26182 3213 Locate
trnC-GCA gene + 27183 27253 71 Locate
petN gene + 27403 27498 96 Locate
psbM gene − 28428 28532 105 Locate
trnD-GUC gene − 29062 29135 74 Locate
trnY-GUA gene − 29252 29335 84 Locate
trnE-UUC gene − 29411 29483 73 Locate
trnT-GGU gene + 30030 30101 72 Locate
psbD gene + 31352 32413 1062 Locate
psbC gene + 32361 33782 1422 Locate
trnS-UGA gene − 34036 34128 93 Locate
psbZ gene + 34462 34650 189 Locate
trnG-GCC gene + 34842 34912 71 Locate
trnM-CAU gene − 35079 35152 74 Locate
rps14 gene − 35302 35604 303 Locate
psaB gene − 35732 37936 2205 Locate
psaA gene − 37962 40214 2253 Locate
ycf3 gene − 40981 42929 1949 Locate
trnS-GGA gene + 43776 43862 87 Locate
rps4 gene − 44163 44768 606 Locate
trnT-UGU gene − 45143 45215 73 Locate
trnL-UAA gene + 45914 46481 568 Locate
trnF-GAA gene + 46781 46853 73 Locate
ndhJ gene − 47471 47947 477 Locate
ndhK gene − 48051 48728 678 Locate
ndhC gene − 48780 49142 363 Locate
trnM-CAU gene + 50909 50981 73 Locate
atpE gene − 51181 51582 402 Locate
atpB gene − 51579 53069 1491 Locate
rbcL gene + 53831 55285 1455 Locate
accD gene + 55962 57023 1062 Locate
psaI gene + 57271 57381 111 Locate
ycf4 gene + 57840 58394 555 Locate
cemA gene + 59053 59742 690 Locate
petA gene + 59956 60918 963 Locate
psbJ gene − 61931 62053 123 Locate
psbL gene − 62193 62309 117 Locate
psbF gene − 62333 62452 120 Locate
psbE gene − 62467 62718 252 Locate
petL gene + 63596 63691 96 Locate
petG gene + 63870 63983 114 Locate
trnW-CCA gene − 64102 64175 74 Locate
trnP-UGG gene − 64349 64422 74 Locate
psaJ gene + 64719 64853 135 Locate
rpl33 gene + 65287 65487 201 Locate
rpl20 gene − 66192 66554 363 Locate
rps12 gene − 67361 67486 126 Locate
clpP gene − 67617 69531 1915 Locate
psbB gene + 69970 71496 1527 Locate
psbT gene + 71681 71788 108 Locate
psbN gene − 71849 71980 132 Locate
psbH gene + 72072 72311 240 Locate
petB gene + 72433 73800 1368 Locate
petD gene + 74661 75185 525 Locate
rpoA gene − 75362 76369 1008 Locate
rps11 gene − 76526 76825 300 Locate
rpl36 gene − 76972 77085 114 Locate
infA gene − 77181 77414 234 Locate
rps8 gene − 77542 77946 405 Locate
rpl14 gene − 78124 78492 369 Locate
rpl16 gene − 78638 79048 411 Locate
rps3 gene − 80108 80770 663 Locate
rpl22 gene − 80755 81222 468 Locate
rpl2 gene − 81625 83110 1486 Locate
rpl23 gene − 83129 83383 255 Locate
trnM-CAU gene − 83566 83639 74 Locate
ycf2 gene + 83728 90537 6810 Locate
ycf15 gene + 90679 90852 174 Locate
trnL-CAA gene − 91138 91218 81 Locate
ndhB gene − 91779 93988 2210 Locate
rps7 gene − 94255 94722 468 Locate
rps12 gene − 95317 95556 240 Locate
trnV-GAC gene + 97177 97248 72 Locate
rrn16S gene + 97477 98967 1491 Locate
trnI gene + 99266 100284 1019 Locate
trnA-UGC gene + 100339 101138 800 Locate
rrn23S gene + 101298 104108 2811 Locate
rrn4.5S gene + 104208 104477 270 Locate
rrn5S gene + 104564 104685 122 Locate
trnR-ACG gene + 104934 105007 74 Locate
trnN-GUU gene − 105527 105598 72 Locate
ycf1 gene + 107188 111402 4215 Locate
rps15 gene + 111791 112063 273 Locate
ndhH gene + 112163 113344 1182 Locate
ndhA gene + 113346 115459 2114 Locate
ndhI gene + 115540 116031 492 Locate
ndhG gene + 116153 116683 531 Locate
ndhE gene + 116927 117232 306 Locate
psaC gene + 117476 117721 246 Locate
ndhD gene + 117820 119349 1530 Locate
ccsA gene − 119585 120571 987 Locate
trnL-UAG gene − 120665 120744 80 Locate
ndhF gene + 122088 124304 2217 Locate
ycf1 gene − 124284 125432 1149 Locate
trnN-GUU gene + 125651 125722 72 Locate
trnR-ACG gene − 126242 126315 74 Locate
rrn5S gene − 126564 126685 122 Locate
rrn4.5S gene − 126772 127041 270 Locate
rrn23S gene − 127141 129951 2811 Locate
trnA-UGC gene − 130111 130910 800 Locate
trnI gene − 130965 131983 1019 Locate
rrn16S gene − 132282 133772 1491 Locate
trnV-GAC gene − 134001 134072 72 Locate
rps12 gene + 135693 135932 240 Locate
rps7 gene + 136527 136994 468 Locate
ndhB gene + 137261 139470 2210 Locate
trnL-CAA gene + 140031 140111 81 Locate
ycf15 gene − 140397 140570 174 Locate
ycf2 gene − 140712 147521 6810 Locate
trnM-CAU gene + 147610 147683 74 Locate
rpl23 gene + 147866 148120 255 Locate
rpl2 gene + 148139 149624 1486 Locate
Status Available
Accession NC_079586.1
Length 149,678 bp
GC content 37.8%
Annotated genes 128
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 15 Ribosomal Protein 22 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources