Gmelina asiatica chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PX904544.1 · 6–79 bp · −
psbA · PX904544.1 · 401–1,459 bp · −
trnK-UUU · PX904544.1 · 1,691–4,265 bp · −
matK · PX904544.1 · 1,991–3,517 bp · −
rps16 · PX904544.1 · 5,154–6,296 bp · −
trnQ-UUG · PX904544.1 · 7,510–7,581 bp · −
trnS-GCU · PX904544.1 · 8,716–8,803 bp · −
atpA · PX904544.1 · 10,678–12,201 bp · −
atpF · PX904544.1 · 12,293–13,563 bp · −
atpH · PX904544.1 · 13,960–14,205 bp · −
atpI · PX904544.1 · 15,214–15,957 bp · −
rps2 · PX904544.1 · 16,189–16,899 bp · −
rpoC2 · PX904544.1 · 17,124–21,308 bp · −
rpoC1 · PX904544.1 · 21,454–24,320 bp · −
rpoB · PX904544.1 · 24,347–27,559 bp · −
psbM · PX904544.1 · 30,741–30,845 bp · −
trnD-GUC · PX904544.1 · 31,366–31,439 bp · −
trnY-GUA · PX904544.1 · 31,548–31,631 bp · −
trnE-UUC · PX904544.1 · 31,691–31,763 bp · −
trnS-UGA · PX904544.1 · 36,473–36,565 bp · −
trnM-CAU · PX904544.1 · 37,619–37,692 bp · −
rps14 · PX904544.1 · 37,842–38,144 bp · −
psaB · PX904544.1 · 38,267–40,471 bp · −
psaA · PX904544.1 · 40,497–42,749 bp · −
ycf3 · PX904544.1 · 43,470–45,417 bp · −
rps4 · PX904544.1 · 46,655–47,260 bp · −
trnT-UGU · PX904544.1 · 47,602–47,674 bp · −
ndhJ · PX904544.1 · 50,006–50,482 bp · −
ndhK · PX904544.1 · 50,584–51,261 bp · −
ndhC · PX904544.1 · 51,314–51,676 bp · −
atpE · PX904544.1 · 53,802–54,203 bp · −
atpB · PX904544.1 · 54,200–55,696 bp · −
psbJ · PX904544.1 · 65,667–65,789 bp · −
psbL · PX904544.1 · 65,923–66,039 bp · −
psbF · PX904544.1 · 66,063–66,182 bp · −
psbE · PX904544.1 · 66,197–66,448 bp · −
trnW-CCA · PX904544.1 · 67,887–67,960 bp · −
trnP-UGG · PX904544.1 · 68,124–68,197 bp · −
rpl20 · PX904544.1 · 70,007–70,393 bp · −
rps12 · PX904544.1 · 71,190–71,303 bp · −
rps12 · PX904544.1 · 99,230–99,472 bp · −
clpP · PX904544.1 · 71,445–73,381 bp · −
psbN · PX904544.1 · 75,729–75,860 bp · −
rpoA · PX904544.1 · 79,276–80,280 bp · −
rps11 · PX904544.1 · 80,352–80,768 bp · −
rpl36 · PX904544.1 · 80,870–80,983 bp · −
infA · PX904544.1 · 81,079–81,312 bp · −
rps8 · PX904544.1 · 81,436–81,840 bp · −
rpl14 · PX904544.1 · 82,029–82,397 bp · −
rpl16 · PX904544.1 · 82,546–82,956 bp · −
rps3 · PX904544.1 · 83,995–84,657 bp · −
rpl22 · PX904544.1 · 84,642–85,106 bp · −
rps19 · PX904544.1 · 85,175–85,453 bp · −
rpl2 · PX904544.1 · 85,508–86,999 bp · −
rpl23 · PX904544.1 · 87,023–87,304 bp · −
trnM-CAU · PX904544.1 · 87,470–87,543 bp · −
trnL-CAA · PX904544.1 · 95,053–95,133 bp · −
ndhB · PX904544.1 · 95,672–97,883 bp · −
rps7 · PX904544.1 · 98,158–98,625 bp · −
rrn4.5S · PX904544.1 · 108,214–108,478 bp · −
trnK-UUU · PX904544.1 · 109,570–109,642 bp · −
ndhF · PX904544.1 · 111,015–113,291 bp · −
ndhD · PX904544.1 · 116,159–117,658 bp · −
psaC · PX904544.1 · 117,780–118,025 bp · −
ndhE · PX904544.1 · 118,281–118,586 bp · −
ndhG · PX904544.1 · 118,797–119,327 bp · −
ndhI · PX904544.1 · 119,660–120,166 bp · −
ndhA · PX904544.1 · 120,248–122,440 bp · −
ndhH · PX904544.1 · 122,442–123,623 bp · −
rps15 · PX904544.1 · 123,719–123,991 bp · −
ycf1 · PX904544.1 · 124,377–129,944 bp · −
trnR-ACG · PX904544.1 · 130,914–130,987 bp · −
rrn5S · PX904544.1 · 131,219–131,349 bp · −
rrn23S · PX904544.1 · 131,806–134,616 bp · −
trnA-UGC · PX904544.1 · 134,813–135,692 bp · −
trnI · PX904544.1 · 135,757–136,773 bp · −
rrn16 · PX904544.1 · 137,600–138,549 bp · −
trnV-GAC · PX904544.1 · 138,779–138,850 bp · −
ycf15 · PX904544.1 · 145,129–145,326 bp · −
ycf2 · PX904544.1 · 145,468–152,289 bp · −
psbK · PX904544.1 · 7,911–8,096 bp · +
psbI · PX904544.1 · 8,473–8,583 bp · +
trnT-CGU · PX904544.1 · 9,541–10,311 bp · +
trnR-UCU · PX904544.1 · 10,491–10,562 bp · +
trnC-GCA · PX904544.1 · 28,722–28,792 bp · +
petN · PX904544.1 · 29,639–29,728 bp · +
trnT-GGU · PX904544.1 · 32,354–32,425 bp · +
psbD · PX904544.1 · 33,808–34,869 bp · +
psbC · PX904544.1 · 34,817–36,238 bp · +
psbZ · PX904544.1 · 36,903–37,091 bp · +
trnG-GCC · PX904544.1 · 37,376–37,446 bp · +
trnS-GGA · PX904544.1 · 46,285–46,371 bp · +
trnL-UAA · PX904544.1 · 48,395–48,966 bp · +
trnF-GAA · PX904544.1 · 49,272–49,344 bp · +
trnM-CAU · PX904544.1 · 53,513–53,585 bp · +
rbcL · PX904544.1 · 56,483–57,925 bp · +
accD · PX904544.1 · 58,646–60,127 bp · +
psaI · PX904544.1 · 60,826–60,936 bp · +
ycf4 · PX904544.1 · 61,379–61,933 bp · +
cemA · PX904544.1 · 62,583–63,272 bp · +
petA · PX904544.1 · 63,496–64,458 bp · +
petL · PX904544.1 · 67,382–67,477 bp · +
petG · PX904544.1 · 67,652–67,765 bp · +
psaJ · PX904544.1 · 68,476–68,610 bp · +
rpl33 · PX904544.1 · 69,091–69,291 bp · +
rps18 · PX904544.1 · 69,460–69,765 bp · +
rps12 · PX904544.1 · 140,449–140,691 bp · +
psbB · PX904544.1 · 73,830–75,356 bp · +
psbT · PX904544.1 · 75,549–75,656 bp · +
psbH · PX904544.1 · 75,966–76,187 bp · +
petB · PX904544.1 · 76,301–77,661 bp · +
petD · PX904544.1 · 78,563–79,087 bp · +
ycf2 · PX904544.1 · 87,632–94,453 bp · +
ycf15 · PX904544.1 · 94,595–94,792 bp · +
trnV-GAC · PX904544.1 · 101,071–101,142 bp · +
rrn16 · PX904544.1 · 101,372–102,321 bp · +
trnI · PX904544.1 · 103,148–104,164 bp · +
trnA-UGC · PX904544.1 · 104,229–105,108 bp · +
rrn23S · PX904544.1 · 105,305–108,115 bp · +
rrn5S · PX904544.1 · 108,572–108,702 bp · +
trnR-ACG · PX904544.1 · 108,934–109,007 bp · +
rpl32 · PX904544.1 · 113,839–114,015 bp · +
trnL-UAG · PX904544.1 · 114,778–114,857 bp · +
ccsA · PX904544.1 · 114,942–115,919 bp · +
trnK-UUU · PX904544.1 · 130,279–130,351 bp · +
rrn4.5S · PX904544.1 · 131,443–131,707 bp · +
rps7 · PX904544.1 · 141,296–141,763 bp · +
ndhB · PX904544.1 · 142,038–144,249 bp · +
trnL-CAA · PX904544.1 · 144,788–144,868 bp · +
trnM-CAU · PX904544.1 · 152,378–152,451 bp · +
rpl23 · PX904544.1 · 152,617–152,898 bp · +
rpl2 · PX904544.1 · 152,922–154,470 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Gmelina asiatica
ANNOTATED PLASTOME
PX904544.1
154,509 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38627 77254 115882 154509 bp
Forward strand 5′ → 3′
psbK psbI trnT-CGU trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI trnA-UGC rrn23S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnK-UUU rrn4.5S rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 rrn4.5S trnK-UUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn23S trnA-UGC trnI rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 6 79 74 Locate
psbA gene − 401 1459 1059 Locate
trnK-UUU gene − 1691 4265 2575 Locate
matK gene − 1991 3517 1527 Locate
rps16 gene − 5154 6296 1143 Locate
trnQ-UUG gene − 7510 7581 72 Locate
psbK gene + 7911 8096 186 Locate
psbI gene + 8473 8583 111 Locate
trnS-GCU gene − 8716 8803 88 Locate
trnT-CGU gene + 9541 10311 771 Locate
trnR-UCU gene + 10491 10562 72 Locate
atpA gene − 10678 12201 1524 Locate
atpF gene − 12293 13563 1271 Locate
atpH gene − 13960 14205 246 Locate
atpI gene − 15214 15957 744 Locate
rps2 gene − 16189 16899 711 Locate
rpoC2 gene − 17124 21308 4185 Locate
rpoC1 gene − 21454 24320 2867 Locate
rpoB gene − 24347 27559 3213 Locate
trnC-GCA gene + 28722 28792 71 Locate
petN gene + 29639 29728 90 Locate
psbM gene − 30741 30845 105 Locate
trnD-GUC gene − 31366 31439 74 Locate
trnY-GUA gene − 31548 31631 84 Locate
trnE-UUC gene − 31691 31763 73 Locate
trnT-GGU gene + 32354 32425 72 Locate
psbD gene + 33808 34869 1062 Locate
psbC gene + 34817 36238 1422 Locate
trnS-UGA gene − 36473 36565 93 Locate
psbZ gene + 36903 37091 189 Locate
trnG-GCC gene + 37376 37446 71 Locate
trnM-CAU gene − 37619 37692 74 Locate
rps14 gene − 37842 38144 303 Locate
psaB gene − 38267 40471 2205 Locate
psaA gene − 40497 42749 2253 Locate
ycf3 gene − 43470 45417 1948 Locate
trnS-GGA gene + 46285 46371 87 Locate
rps4 gene − 46655 47260 606 Locate
trnT-UGU gene − 47602 47674 73 Locate
trnL-UAA gene + 48395 48966 572 Locate
trnF-GAA gene + 49272 49344 73 Locate
ndhJ gene − 50006 50482 477 Locate
ndhK gene − 50584 51261 678 Locate
ndhC gene − 51314 51676 363 Locate
trnM-CAU gene + 53513 53585 73 Locate
atpE gene − 53802 54203 402 Locate
atpB gene − 54200 55696 1497 Locate
rbcL gene + 56483 57925 1443 Locate
accD gene + 58646 60127 1482 Locate
psaI gene + 60826 60936 111 Locate
ycf4 gene + 61379 61933 555 Locate
cemA gene + 62583 63272 690 Locate
petA gene + 63496 64458 963 Locate
psbJ gene − 65667 65789 123 Locate
psbL gene − 65923 66039 117 Locate
psbF gene − 66063 66182 120 Locate
psbE gene − 66197 66448 252 Locate
petL gene + 67382 67477 96 Locate
petG gene + 67652 67765 114 Locate
trnW-CCA gene − 67887 67960 74 Locate
trnP-UGG gene − 68124 68197 74 Locate
psaJ gene + 68476 68610 135 Locate
rpl33 gene + 69091 69291 201 Locate
rps18 gene + 69460 69765 306 Locate
rpl20 gene − 70007 70393 387 Locate
rps12 gene − 71190 71303 114 Locate
clpP gene − 71445 73381 1937 Locate
psbB gene + 73830 75356 1527 Locate
psbT gene + 75549 75656 108 Locate
psbN gene − 75729 75860 132 Locate
psbH gene + 75966 76187 222 Locate
petB gene + 76301 77661 1361 Locate
petD gene + 78563 79087 525 Locate
rpoA gene − 79276 80280 1005 Locate
rps11 gene − 80352 80768 417 Locate
rpl36 gene − 80870 80983 114 Locate
infA gene − 81079 81312 234 Locate
rps8 gene − 81436 81840 405 Locate
rpl14 gene − 82029 82397 369 Locate
rpl16 gene − 82546 82956 411 Locate
rps3 gene − 83995 84657 663 Locate
rpl22 gene − 84642 85106 465 Locate
rps19 gene − 85175 85453 279 Locate
rpl2 gene − 85508 86999 1492 Locate
rpl23 gene − 87023 87304 282 Locate
trnM-CAU gene − 87470 87543 74 Locate
ycf2 gene + 87632 94453 6822 Locate
ycf15 gene + 94595 94792 198 Locate
trnL-CAA gene − 95053 95133 81 Locate
ndhB gene − 95672 97883 2212 Locate
rps7 gene − 98158 98625 468 Locate
rps12 gene − 99230 99472 243 Locate
trnV-GAC gene + 101071 101142 72 Locate
rrn16 gene + 101372 102321 950 Locate
trnI gene + 103148 104164 1017 Locate
trnA-UGC gene + 104229 105108 880 Locate
rrn23S gene + 105305 108115 2811 Locate
rrn4.5S gene − 108214 108478 265 Locate
rrn5S gene + 108572 108702 131 Locate
trnR-ACG gene + 108934 109007 74 Locate
trnK-UUU gene − 109570 109642 73 Locate
ndhF gene − 111015 113291 2277 Locate
rpl32 gene + 113839 114015 177 Locate
trnL-UAG gene + 114778 114857 80 Locate
ccsA gene + 114942 115919 978 Locate
ndhD gene − 116159 117658 1500 Locate
psaC gene − 117780 118025 246 Locate
ndhE gene − 118281 118586 306 Locate
ndhG gene − 118797 119327 531 Locate
ndhI gene − 119660 120166 507 Locate
ndhA gene − 120248 122440 2193 Locate
ndhH gene − 122442 123623 1182 Locate
rps15 gene − 123719 123991 273 Locate
ycf1 gene − 124377 129944 5568 Locate
trnK-UUU gene + 130279 130351 73 Locate
trnR-ACG gene − 130914 130987 74 Locate
rrn5S gene − 131219 131349 131 Locate
rrn4.5S gene + 131443 131707 265 Locate
rrn23S gene − 131806 134616 2811 Locate
trnA-UGC gene − 134813 135692 880 Locate
trnI gene − 135757 136773 1017 Locate
rrn16 gene − 137600 138549 950 Locate
trnV-GAC gene − 138779 138850 72 Locate
rps12 gene + 140449 140691 243 Locate
rps7 gene + 141296 141763 468 Locate
ndhB gene + 142038 144249 2212 Locate
trnL-CAA gene + 144788 144868 81 Locate
ycf15 gene − 145129 145326 198 Locate
ycf2 gene − 145468 152289 6822 Locate
trnM-CAU gene + 152378 152451 74 Locate
rpl23 gene + 152617 152898 282 Locate
rpl2 gene + 152922 154470 1549 Locate
Status Available
Accession PX904544.1
Length 154,509 bp
GC content 37.9%
Annotated genes 131
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources