Coordinate-aware organelle record

Isodon serra chloroplast genome

Available NC_064127.1 152,312 bp 128 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

128 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	316	1375	1059
trnK-UUU	gene	translation-rna	−	1611	4189	2578
matK	gene	other	−	1932	3453	1521
rps16	gene	ribosomal-protein	−	4725	5867	1142
trnQ-UUG	gene	translation-rna	−	6723	6795	72
psbK	gene	photosystem-ii	+	7189	7375	186
psbI	gene	photosystem-ii	+	7765	7876	111
trnS-GCU	gene	translation-rna	−	8011	8099	88
trnT-CGU	gene	translation-rna	+	8765	9526	761
trnR-UCU	gene	translation-rna	+	9715	9787	72
atpA	gene	atp-synthase	−	9891	11415	1524
atpF	gene	atp-synthase	−	11515	12762	1247
atpH	gene	atp-synthase	−	13053	13299	246
atpI	gene	atp-synthase	−	14237	14981	744
rps2	gene	ribosomal-protein	−	15206	15917	711
rpoC2	gene	rna-polymerase	−	16131	20307	4176
rpoC1	gene	rna-polymerase	−	20483	23317	2834
rpoB	gene	rna-polymerase	−	23343	26556	3213
trnC-GCA	gene	translation-rna	+	27747	27818	71
petN	gene	cytochrome	+	27980	28070	90
psbM	gene	photosystem-ii	−	29079	29184	105
trnD-GUC	gene	translation-rna	−	29702	29776	74
trnY-GUA	gene	translation-rna	−	29886	29970	84
trnE-UUC	gene	translation-rna	−	30047	30120	73
trnT-GGU	gene	translation-rna	+	30695	30767	72
psbD	gene	photosystem-ii	+	32139	33201	1062
psbC	gene	photosystem-ii	+	33148	34570	1422
trnS-UGA	gene	translation-rna	−	34805	34898	93
psbZ	gene	photosystem-ii	+	35238	35427	189
trnG-GCC	gene	translation-rna	+	35664	35735	71
trnM-CAU	gene	translation-rna	−	35907	35981	74
rps14	gene	ribosomal-protein	−	36125	36428	303
psaB	gene	photosystem-i	−	36550	38755	2205
psaA	gene	photosystem-i	−	38780	41033	2253
ycf3	gene	other	−	41831	43792	1961
trnS-GGA	gene	translation-rna	+	44636	44723	87
rps4	gene	ribosomal-protein	−	45019	45625	606
trnT-UGU	gene	translation-rna	−	46038	46111	73
trnL-UAA	gene	translation-rna	+	46804	47348	544
trnF-GAA	gene	translation-rna	+	47647	47720	73
ndhJ	gene	nad-dehydrogenase	−	48397	48874	477
ndhK	gene	nad-dehydrogenase	−	48984	49662	678
ndhC	gene	nad-dehydrogenase	−	49713	50076	363
trnM-CAU	gene	translation-rna	+	51868	51941	73
atpE	gene	atp-synthase	−	52146	52548	402
atpB	gene	atp-synthase	−	52544	54041	1497
rbcL	gene	other	+	54839	56285	1446
accD	gene	other	+	56898	58449	1551
psaI	gene	photosystem-i	+	59146	59257	111
ycf4	gene	other	+	59701	60256	555
cemA	gene	other	+	60841	61531	690
petA	gene	cytochrome	+	61745	62708	963
psbJ	gene	photosystem-ii	−	63715	63838	123
psbL	gene	photosystem-ii	−	63972	64089	117
psbF	gene	photosystem-ii	−	64112	64232	120
psbE	gene	photosystem-ii	−	64246	64498	252
petL	gene	cytochrome	+	65391	65487	96
petG	gene	cytochrome	+	65661	65775	114
trnW-CCA	gene	translation-rna	−	65897	65971	74
trnP-UGG	gene	translation-rna	−	66140	66214	74
psaJ	gene	photosystem-i	+	66497	66632	135
rpl33	gene	ribosomal-protein	+	67079	67280	201
rps18	gene	ribosomal-protein	+	67446	67752	306
rpl20	gene	ribosomal-protein	−	67986	68373	387
rps12	gene	ribosomal-protein	−	69105	97280	28175
rps12	gene	ribosomal-protein	+	69105	138494	69389
clpP	gene	other	−	69337	71266	1929
psbB	gene	photosystem-ii	+	71738	73265	1527
psbT	gene	photosystem-ii	+	73450	73552	102
psbN	gene	photosystem-ii	−	73617	73749	132
psbH	gene	photosystem-ii	+	73854	74073	219
petB	gene	cytochrome	+	74207	75565	1358
petD	gene	cytochrome	+	76422	76947	525
rpoA	gene	rna-polymerase	−	77123	78131	1008
rps11	gene	ribosomal-protein	−	78202	78619	417
rpl36	gene	ribosomal-protein	−	78728	78842	114
infA	gene	other	−	78937	79171	234
rps8	gene	ribosomal-protein	−	79296	79701	405
rpl14	gene	ribosomal-protein	−	79872	80241	369
rpl16	gene	ribosomal-protein	−	80378	81646	1268
rps3	gene	ribosomal-protein	−	81798	82461	663
rpl22	gene	ribosomal-protein	−	82445	82919	474
rps19	gene	ribosomal-protein	−	82983	83262	279
rpl2	gene	ribosomal-protein	−	83329	84808	1479
rpl23	gene	ribosomal-protein	−	84826	85108	282
trnM-CAU	gene	translation-rna	−	85273	85347	74
ycf2	gene	other	+	85441	92245	6804
trnL-CAA	gene	translation-rna	−	92844	92925	81
ndhB	gene	nad-dehydrogenase	−	93487	95695	2208
rps7	gene	ribosomal-protein	−	95965	96433	468
trnV-GAC	gene	translation-rna	+	98952	99024	72
rrn16S	gene	ribosomal-rna	+	99250	100741	1491
trnI	gene	translation-rna	+	101038	102057	1019
trnA-UGC	gene	translation-rna	+	102121	103000	879
rrn23S	gene	ribosomal-rna	+	103163	105974	2811
rrn4.5S	gene	ribosomal-rna	−	106072	106337	265
rrn5S	gene	ribosomal-rna	+	106430	106561	131
trnR-ACG	gene	translation-rna	+	106794	106868	74
trnN-GUU	gene	translation-rna	−	107440	107512	72
ndhF	gene	nad-dehydrogenase	−	108876	111108	2232
trnL-UAG	gene	translation-rna	+	112520	112600	80
ccsA	gene	other	+	112687	113659	972
ndhD	gene	nad-dehydrogenase	−	113882	115382	1500
psaC	gene	photosystem-i	−	115502	115748	246
ndhE	gene	nad-dehydrogenase	−	116003	116309	306
ndhG	gene	nad-dehydrogenase	−	116523	117054	531
ndhI	gene	nad-dehydrogenase	−	117422	117929	507
ndhA	gene	nad-dehydrogenase	−	118009	120119	2110
ndhH	gene	nad-dehydrogenase	−	120120	121302	1182
rps15	gene	ribosomal-protein	−	121416	121680	264
ycf1	gene	other	−	122120	127679	5559
trnN-GUU	gene	translation-rna	+	128019	128091	72
trnR-ACG	gene	translation-rna	−	128663	128737	74
rrn5S	gene	ribosomal-rna	−	128970	129101	131
rrn4.5S	gene	ribosomal-rna	+	129194	129459	265
rrn23S	gene	ribosomal-rna	−	129557	132368	2811
trnA-UGC	gene	translation-rna	−	132531	133410	879
trnI	gene	translation-rna	−	133474	134493	1019
rrn16S	gene	ribosomal-rna	−	134790	136281	1491
trnV-GAC	gene	translation-rna	−	136507	136579	72
rps7	gene	ribosomal-protein	+	139098	139566	468
ndhB	gene	nad-dehydrogenase	+	139836	142044	2208
trnL-CAA	gene	translation-rna	+	142606	142687	81
ycf2	gene	other	−	143286	150090	6804
trnM-CAU	gene	translation-rna	+	150184	150258	74
rpl23	gene	ribosomal-protein	+	150423	150705	282
rpl2	gene	ribosomal-protein	+	150723	152202	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_064127.1DNA · accDNC_064127DNA · atpBNC_064127DNA · matKNC_064127DNA · ndhFNC_064127DNA · psbANC_064127DNA · rbcLNC_064127DNA · rps12NC_064127DNA · ycf1NC_064127