Lycopus europaeus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_064128.1 · 11–84 bp · −
psbA · NC_064128.1 · 416–1,474 bp · −
trnK-UUU · NC_064128.1 · 1,705–4,296 bp · −
matK · NC_064128.1 · 2,031–3,560 bp · −
rps16 · NC_064128.1 · 4,852–5,965 bp · −
trnQ-UUG · NC_064128.1 · 6,981–7,052 bp · −
trnS-GCU · NC_064128.1 · 8,317–8,404 bp · −
atpA · NC_064128.1 · 10,233–11,756 bp · −
atpF · NC_064128.1 · 11,853–13,107 bp · −
atpH · NC_064128.1 · 13,381–13,626 bp · −
atpI · NC_064128.1 · 14,269–15,012 bp · −
rps2 · NC_064128.1 · 15,248–15,958 bp · −
rpoC2 · NC_064128.1 · 16,173–20,360 bp · −
rpoC1 · NC_064128.1 · 20,519–23,318 bp · −
rpoB · NC_064128.1 · 23,345–26,557 bp · −
psbM · NC_064128.1 · 29,112–29,216 bp · −
trnD-GUC · NC_064128.1 · 29,740–29,813 bp · −
trnY-GUA · NC_064128.1 · 29,924–30,007 bp · −
trnE-UUC · NC_064128.1 · 30,089–30,161 bp · −
trnS-UGA · NC_064128.1 · 34,865–34,957 bp · −
trnM-CAU · NC_064128.1 · 35,990–36,063 bp · −
rps14 · NC_064128.1 · 36,213–36,515 bp · −
psaB · NC_064128.1 · 36,638–38,842 bp · −
psaA · NC_064128.1 · 38,868–41,120 bp · −
ycf3 · NC_064128.1 · 41,944–43,889 bp · −
rps4 · NC_064128.1 · 44,889–45,494 bp · −
trnT-UGU · NC_064128.1 · 45,862–45,934 bp · −
ndhJ · NC_064128.1 · 48,231–48,707 bp · −
ndhK · NC_064128.1 · 48,818–49,495 bp · −
ndhC · NC_064128.1 · 49,552–49,914 bp · −
atpE · NC_064128.1 · 51,985–52,386 bp · −
atpB · NC_064128.1 · 52,383–53,879 bp · −
psbJ · NC_064128.1 · 63,462–63,584 bp · −
psbL · NC_064128.1 · 63,719–63,835 bp · −
psbF · NC_064128.1 · 63,859–63,978 bp · −
psbE · NC_064128.1 · 63,993–64,244 bp · −
trnW-CCA · NC_064128.1 · 65,651–65,724 bp · −
trnP-UGG · NC_064128.1 · 65,898–65,971 bp · −
rpl20 · NC_064128.1 · 67,762–68,148 bp · −
rps12 · NC_064128.1 · 68,966–69,079 bp · −
rps12 · NC_064128.1 · 96,390–97,183 bp · −
clpP · NC_064128.1 · 69,203–71,116 bp · −
psbN · NC_064128.1 · 73,451–73,582 bp · −
rpoA · NC_064128.1 · 76,980–77,987 bp · −
rps11 · NC_064128.1 · 78,066–78,482 bp · −
rpl36 · NC_064128.1 · 78,592–78,705 bp · −
infA · NC_064128.1 · 78,801–79,034 bp · −
rps8 · NC_064128.1 · 79,161–79,565 bp · −
rpl14 · NC_064128.1 · 79,756–80,124 bp · −
rpl16 · NC_064128.1 · 80,252–81,532 bp · −
rps3 · NC_064128.1 · 81,684–82,346 bp · −
rpl22 · NC_064128.1 · 82,331–82,798 bp · −
rps19 · NC_064128.1 · 82,868–83,146 bp · −
rpl2 · NC_064128.1 · 83,206–84,695 bp · −
rpl23 · NC_064128.1 · 84,714–84,995 bp · −
trnM-CAU · NC_064128.1 · 85,161–85,234 bp · −
trnL-CAA · NC_064128.1 · 92,754–92,834 bp · −
ndhB · NC_064128.1 · 93,395–95,602 bp · −
rps7 · NC_064128.1 · 95,869–96,336 bp · −
trnN-GUU · NC_064128.1 · 107,271–107,342 bp · −
ndhF · NC_064128.1 · 108,696–110,927 bp · −
ndhD · NC_064128.1 · 113,732–115,261 bp · −
psaC · NC_064128.1 · 115,357–115,602 bp · −
ndhE · NC_064128.1 · 115,851–116,156 bp · −
ndhG · NC_064128.1 · 116,375–116,905 bp · −
ndhI · NC_064128.1 · 117,280–117,792 bp · −
ndhA · NC_064128.1 · 117,873–119,967 bp · −
ndhH · NC_064128.1 · 119,969–121,150 bp · −
rps15 · NC_064128.1 · 121,250–121,522 bp · −
ycf1 · NC_064128.1 · 121,965–127,517 bp · −
trnR-ACG · NC_064128.1 · 128,443–128,516 bp · −
rrn5S · NC_064128.1 · 128,766–128,886 bp · −
rrn4.5S · NC_064128.1 · 129,147–129,249 bp · −
rrn23S · NC_064128.1 · 129,348–132,158 bp · −
trnA-UGC · NC_064128.1 · 132,318–133,196 bp · −
trnI · NC_064128.1 · 133,261–134,279 bp · −
rrn16S · NC_064128.1 · 134,578–136,068 bp · −
trnV-GAC · NC_064128.1 · 136,295–136,366 bp · −
ycf15 · NC_064128.1 · 142,696–142,893 bp · −
ycf2 · NC_064128.1 · 143,027–149,866 bp · −
psbK · NC_064128.1 · 7,448–7,633 bp · +
psbI · NC_064128.1 · 8,025–8,135 bp · +
trnT-CGU · NC_064128.1 · 9,104–9,866 bp · +
trnR-UCU · NC_064128.1 · 10,053–10,124 bp · +
trnC-GCA · NC_064128.1 · 27,740–27,810 bp · +
petN · NC_064128.1 · 27,974–28,063 bp · +
trnT-GGU · NC_064128.1 · 30,730–30,801 bp · +
psbD · NC_064128.1 · 32,188–33,249 bp · +
psbC · NC_064128.1 · 33,197–34,618 bp · +
psbZ · NC_064128.1 · 35,292–35,480 bp · +
trnG-GCC · NC_064128.1 · 35,759–35,829 bp · +
trnS-GGA · NC_064128.1 · 44,522–44,608 bp · +
trnL-UAA · NC_064128.1 · 46,626–47,194 bp · +
trnF-GAA · NC_064128.1 · 47,484–47,556 bp · +
trnM-CAU · NC_064128.1 · 51,702–51,774 bp · +
rbcL · NC_064128.1 · 54,674–56,107 bp · +
accD · NC_064128.1 · 56,812–58,293 bp · +
psaI · NC_064128.1 · 58,767–58,877 bp · +
ycf4 · NC_064128.1 · 59,327–59,881 bp · +
cemA · NC_064128.1 · 60,560–61,249 bp · +
petA · NC_064128.1 · 61,463–62,425 bp · +
petL · NC_064128.1 · 65,151–65,246 bp · +
petG · NC_064128.1 · 65,423–65,536 bp · +
psaJ · NC_064128.1 · 66,252–66,386 bp · +
rpl33 · NC_064128.1 · 66,842–67,042 bp · +
rps18 · NC_064128.1 · 67,224–67,529 bp · +
rps12 · NC_064128.1 · 138,006–138,799 bp · +
psbB · NC_064128.1 · 71,565–73,091 bp · +
psbT · NC_064128.1 · 73,276–73,377 bp · +
psbH · NC_064128.1 · 73,688–73,909 bp · +
petB · NC_064128.1 · 74,033–75,405 bp · +
petD · NC_064128.1 · 75,593–76,794 bp · +
ycf2 · NC_064128.1 · 85,323–92,162 bp · +
ycf15 · NC_064128.1 · 92,296–92,493 bp · +
trnV-GAC · NC_064128.1 · 98,823–98,894 bp · +
rrn16S · NC_064128.1 · 99,121–100,611 bp · +
trnI · NC_064128.1 · 100,910–101,928 bp · +
trnA-UGC · NC_064128.1 · 101,993–102,871 bp · +
rrn23S · NC_064128.1 · 103,031–105,841 bp · +
rrn4.5S · NC_064128.1 · 105,940–106,042 bp · +
rrn5S · NC_064128.1 · 106,303–106,423 bp · +
trnR-ACG · NC_064128.1 · 106,673–106,746 bp · +
rpl32 · NC_064128.1 · 111,402–111,572 bp · +
trnL-UAG · NC_064128.1 · 112,330–112,409 bp · +
ccsA · NC_064128.1 · 112,509–113,486 bp · +
trnN-GUU · NC_064128.1 · 127,847–127,918 bp · +
rps7 · NC_064128.1 · 138,853–139,320 bp · +
ndhB · NC_064128.1 · 139,587–141,794 bp · +
trnL-CAA · NC_064128.1 · 142,355–142,435 bp · +
trnM-CAU · NC_064128.1 · 149,955–150,028 bp · +
rpl23 · NC_064128.1 · 150,194–150,475 bp · +
rpl2 · NC_064128.1 · 150,494–151,983 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Lycopus europaeus
ANNOTATED PLASTOME
NC_064128.1
152,085 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38021 76042 114064 152085 bp
Forward strand 5′ → 3′
psbK psbI trnT-CGU trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 416 1474 1059 Locate
trnK-UUU gene − 1705 4296 2592 Locate
matK gene − 2031 3560 1530 Locate
rps16 gene − 4852 5965 1114 Locate
trnQ-UUG gene − 6981 7052 72 Locate
psbK gene + 7448 7633 186 Locate
psbI gene + 8025 8135 111 Locate
trnS-GCU gene − 8317 8404 88 Locate
trnT-CGU gene + 9104 9866 763 Locate
trnR-UCU gene + 10053 10124 72 Locate
atpA gene − 10233 11756 1524 Locate
atpF gene − 11853 13107 1255 Locate
atpH gene − 13381 13626 246 Locate
atpI gene − 14269 15012 744 Locate
rps2 gene − 15248 15958 711 Locate
rpoC2 gene − 16173 20360 4188 Locate
rpoC1 gene − 20519 23318 2800 Locate
rpoB gene − 23345 26557 3213 Locate
trnC-GCA gene + 27740 27810 71 Locate
petN gene + 27974 28063 90 Locate
psbM gene − 29112 29216 105 Locate
trnD-GUC gene − 29740 29813 74 Locate
trnY-GUA gene − 29924 30007 84 Locate
trnE-UUC gene − 30089 30161 73 Locate
trnT-GGU gene + 30730 30801 72 Locate
psbD gene + 32188 33249 1062 Locate
psbC gene + 33197 34618 1422 Locate
trnS-UGA gene − 34865 34957 93 Locate
psbZ gene + 35292 35480 189 Locate
trnG-GCC gene + 35759 35829 71 Locate
trnM-CAU gene − 35990 36063 74 Locate
rps14 gene − 36213 36515 303 Locate
psaB gene − 36638 38842 2205 Locate
psaA gene − 38868 41120 2253 Locate
ycf3 gene − 41944 43889 1946 Locate
trnS-GGA gene + 44522 44608 87 Locate
rps4 gene − 44889 45494 606 Locate
trnT-UGU gene − 45862 45934 73 Locate
trnL-UAA gene + 46626 47194 569 Locate
trnF-GAA gene + 47484 47556 73 Locate
ndhJ gene − 48231 48707 477 Locate
ndhK gene − 48818 49495 678 Locate
ndhC gene − 49552 49914 363 Locate
trnM-CAU gene + 51702 51774 73 Locate
atpE gene − 51985 52386 402 Locate
atpB gene − 52383 53879 1497 Locate
rbcL gene + 54674 56107 1434 Locate
accD gene + 56812 58293 1482 Locate
psaI gene + 58767 58877 111 Locate
ycf4 gene + 59327 59881 555 Locate
cemA gene + 60560 61249 690 Locate
petA gene + 61463 62425 963 Locate
psbJ gene − 63462 63584 123 Locate
psbL gene − 63719 63835 117 Locate
psbF gene − 63859 63978 120 Locate
psbE gene − 63993 64244 252 Locate
petL gene + 65151 65246 96 Locate
petG gene + 65423 65536 114 Locate
trnW-CCA gene − 65651 65724 74 Locate
trnP-UGG gene − 65898 65971 74 Locate
psaJ gene + 66252 66386 135 Locate
rpl33 gene + 66842 67042 201 Locate
rps18 gene + 67224 67529 306 Locate
rpl20 gene − 67762 68148 387 Locate
rps12 gene − 68966 69079 114 Locate
clpP gene − 69203 71116 1914 Locate
psbB gene + 71565 73091 1527 Locate
psbT gene + 73276 73377 102 Locate
psbN gene − 73451 73582 132 Locate
psbH gene + 73688 73909 222 Locate
petB gene + 74033 75405 1373 Locate
petD gene + 75593 76794 1202 Locate
rpoA gene − 76980 77987 1008 Locate
rps11 gene − 78066 78482 417 Locate
rpl36 gene − 78592 78705 114 Locate
infA gene − 78801 79034 234 Locate
rps8 gene − 79161 79565 405 Locate
rpl14 gene − 79756 80124 369 Locate
rpl16 gene − 80252 81532 1281 Locate
rps3 gene − 81684 82346 663 Locate
rpl22 gene − 82331 82798 468 Locate
rps19 gene − 82868 83146 279 Locate
rpl2 gene − 83206 84695 1490 Locate
rpl23 gene − 84714 84995 282 Locate
trnM-CAU gene − 85161 85234 74 Locate
ycf2 gene + 85323 92162 6840 Locate
ycf15 gene + 92296 92493 198 Locate
trnL-CAA gene − 92754 92834 81 Locate
ndhB gene − 93395 95602 2208 Locate
rps7 gene − 95869 96336 468 Locate
rps12 gene − 96390 97183 794 Locate
trnV-GAC gene + 98823 98894 72 Locate
rrn16S gene + 99121 100611 1491 Locate
trnI gene + 100910 101928 1019 Locate
trnA-UGC gene + 101993 102871 879 Locate
rrn23S gene + 103031 105841 2811 Locate
rrn4.5S gene + 105940 106042 103 Locate
rrn5S gene + 106303 106423 121 Locate
trnR-ACG gene + 106673 106746 74 Locate
trnN-GUU gene − 107271 107342 72 Locate
ndhF gene − 108696 110927 2232 Locate
rpl32 gene + 111402 111572 171 Locate
trnL-UAG gene + 112330 112409 80 Locate
ccsA gene + 112509 113486 978 Locate
ndhD gene − 113732 115261 1530 Locate
psaC gene − 115357 115602 246 Locate
ndhE gene − 115851 116156 306 Locate
ndhG gene − 116375 116905 531 Locate
ndhI gene − 117280 117792 513 Locate
ndhA gene − 117873 119967 2095 Locate
ndhH gene − 119969 121150 1182 Locate
rps15 gene − 121250 121522 273 Locate
ycf1 gene − 121965 127517 5553 Locate
trnN-GUU gene + 127847 127918 72 Locate
trnR-ACG gene − 128443 128516 74 Locate
rrn5S gene − 128766 128886 121 Locate
rrn4.5S gene − 129147 129249 103 Locate
rrn23S gene − 129348 132158 2811 Locate
trnA-UGC gene − 132318 133196 879 Locate
trnI gene − 133261 134279 1019 Locate
rrn16S gene − 134578 136068 1491 Locate
trnV-GAC gene − 136295 136366 72 Locate
rps12 gene + 138006 138799 794 Locate
rps7 gene + 138853 139320 468 Locate
ndhB gene + 139587 141794 2208 Locate
trnL-CAA gene + 142355 142435 81 Locate
ycf15 gene − 142696 142893 198 Locate
ycf2 gene − 143027 149866 6840 Locate
trnM-CAU gene + 149955 150028 74 Locate
rpl23 gene + 150194 150475 282 Locate
rpl2 gene + 150494 151983 1490 Locate
Status Available
Accession NC_064128.1
Length 152,085 bp
GC content 38.0%
Annotated genes 131
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources