Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g27333.t1Flavonoid · F3H
g27629.t1Flavonoid · F3H
g30116.t1Flavonoid · F3H
g30488.t1Flavonoid · F3H
g30488.t1.1.5b2d4a2cFlavonoid · F3H
g32085.t1Flavonoid · F3H
g32254.t1Flavonoid · F3H
g32254.t1.1.5b2d4a2dFlavonoid · F3H
g32254.t1.2.5b2d4a2dFlavonoid · F3H
g32254.t1.3.5b2d4a2dFlavonoid · F3H
g335.t1Flavonoid · F3H
g335.t1.1.5b2d4a22Flavonoid · F3H
g33596.t1Flavonoid · F3H
g33597.t1Flavonoid · F3H
g33642.t1Flavonoid · F3H
g33642.t1.1.5b2d4a2eFlavonoid · F3H
g33642.t1.2.5b2d4a2eFlavonoid · F3H
g36163.t1Flavonoid · F3H
g3756.t1Flavonoid · F3H
g39188.t1Flavonoid · F3H
g41383.t1Flavonoid · F3H
g45771.t1Flavonoid · F3H
g50052.t1Flavonoid · F3H
g540.t1Flavonoid · F3H
g8035.t1Flavonoid · F3H
g8035.t1.1.5b2d4a2dFlavonoid · F3H
g8035.t1.2.5b2d4a2dFlavonoid · F3H
g962.t1Flavonoid · F3H
g962.t1.1.5b2d4a2bFlavonoid · F3H
g962.t1.2.5b2d4a2bFlavonoid · F3H
g962.t1.2.5b2d4a2b.1.5b2d6aecFlavonoid · F3H
g10216.t1Flavonoid · F3H_CYP75B
g10216.t1.1.5b2d4a30Flavonoid · F3H_CYP75B
g10216.t1.2.5b2d4a30Flavonoid · F3H_CYP75B
g10216.t1.3.5b2d4a30Flavonoid · F3H_CYP75B
g10216.t1.4.5b2d4a30Flavonoid · F3H_CYP75B
g11928.t1Flavonoid · F3H_CYP75B
g13281.t1Flavonoid · F3H_CYP75B
g14470.t1Flavonoid · F3H_CYP75B
g15212.t1Flavonoid · F3H_CYP75B
g17052.t1.1.5b2d4a23Flavonoid · F3H_CYP75B
g17654.t1Flavonoid · F3H_CYP75B
g18242.t1.1.5b2d4a24Flavonoid · F3H_CYP75B
g20985.t1Flavonoid · F3H_CYP75B
g20985.t1.1.5b2d4a26Flavonoid · F3H_CYP75B
g21184.t1Flavonoid · F3H_CYP75B
g24647.t1Flavonoid · F3H_CYP75B
g25988.t1Flavonoid · F3H_CYP75B
g25988.t1.1.5b2d4a29Flavonoid · F3H_CYP75B
g25988.t1.1.5b2d4a29.1.5b2d6aeaFlavonoid · F3H_CYP75B

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.