Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g49055.t1Alkaloid · COR
g49055.t1.1.5b2d6ae6Alkaloid · COR
g5612.t1Alkaloid · COR
g21669.t1Alkaloid · CYP719
g21669.t1.1.5b2d4a27Alkaloid · CYP719
g21669.t1.2.5b2d4a27Alkaloid · CYP719
g26298.t1Alkaloid · CYP719
g26298.t1.1.5b2d4a29Alkaloid · CYP719
g26298.t1.2.5b2d4a29Alkaloid · CYP719
g46299.t1Alkaloid · CYP719
g51814.t1Alkaloid · CYP719
g9536.t1Alkaloid · CYP719
g11657.t1Alkaloid · CYP80B1
g31628.t1Alkaloid · CYP80B1
g10882.t1Alkaloid · G8O_G8H
g26139.t1Alkaloid · G8O_G8H
g26139.t1.1.5b2d4a29Alkaloid · G8O_G8H
g26139.t1.2.5b2d4a29Alkaloid · G8O_G8H
g39069.t1Alkaloid · G8O_G8H
g40188.t1Alkaloid · G8O_G8H
g52203.t1Alkaloid · G8O_G8H
g1158.t1Alkaloid · GES
g11673.t1Alkaloid · GES
g11673.t1.1.5b2d4a31Alkaloid · GES
g11673.t1.2.5b2d4a31Alkaloid · GES
g11673.t1.3.5b2d4a31Alkaloid · GES
g15352.t1Alkaloid · GES
g20187.t1Alkaloid · GES
g20187.t1.1.5b2d4a26Alkaloid · GES
g20189.t1Alkaloid · GES
g21407.t1Alkaloid · GES
g22462.t1Alkaloid · GES
g2292.t1Alkaloid · GES
g2295.t1Alkaloid · GES
g23167.t1Alkaloid · GES
g23900.t1Alkaloid · GES
g25185.t1Alkaloid · GES
g26133.t1Alkaloid · GES
g26133.t1.1.5b2d4a29Alkaloid · GES
g26133.t1.1.5b2d4a29.1.5b2d6aeaAlkaloid · GES
g26898.t1Alkaloid · GES
g26898.t1.1.5b2d4a2aAlkaloid · GES
g26898.t1.2.5b2d4a2aAlkaloid · GES
g26898.t1.3.5b2d4a2aAlkaloid · GES
g26898.t1.3.5b2d4a2a.1.5b2d6aeaAlkaloid · GES
g3232.t1Alkaloid · GES
g3232.t1.1.5b2d4a24Alkaloid · GES
g3232.t1.1.5b2d4a24.1.5b2d6ae4Alkaloid · GES
g3232.t1.2.5b2d4a24Alkaloid · GES
g3232.t1.3.5b2d4a24Alkaloid · GES

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.