Species pathway expression context

Nepeta mussinii

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_mussinii.gene_tpm_log1p.tsv
Samples
7
Matrix genes
30,147
Expressed genes
24,957
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g8529.t1.1.5b2c7c7cAlkaloid · STR
g8529.t1.2.5b2c7c7cAlkaloid · STR
g9281.t1Alkaloid · STR
g9281.t1.1.5b2c7c7cAlkaloid · STR
g3175.t1Alkaloid · TDC
g3703.t1Alkaloid · TDC
g10251.t1Alkaloid · TRI_TRII
g10455.t1Alkaloid · TRI_TRII
g10455.t1.1.5b2c7c7dAlkaloid · TRI_TRII
g11681.t1Alkaloid · TRI_TRII
g11681.t1.1.5b2c7c7eAlkaloid · TRI_TRII
g14261.t1Alkaloid · TRI_TRII
g14261.t1.1.5b2c7c80Alkaloid · TRI_TRII
g14261.t1.2.5b2c7c80Alkaloid · TRI_TRII
g14261.t1.3.5b2c7c80Alkaloid · TRI_TRII
g14261.t1.4.5b2c7c80Alkaloid · TRI_TRII
g14338.t1Alkaloid · TRI_TRII
g15402.t1.1.5b2c7c81Alkaloid · TRI_TRII
g18089.t1Alkaloid · TRI_TRII
g18834.t1_g18835.t1Alkaloid · TRI_TRII
g18834.t1_g18835.t1.1.5b2c957dAlkaloid · TRI_TRII
g18834.t1_g18835.t1.2.5b2c957dAlkaloid · TRI_TRII
g19234.t1Alkaloid · TRI_TRII
g19234.t1.1.5b2c7c79Alkaloid · TRI_TRII
g20228.t1Alkaloid · TRI_TRII
g20733.t1Alkaloid · TRI_TRII
g21291.t1Alkaloid · TRI_TRII
g21527.t1Alkaloid · TRI_TRII
g21528.t1Alkaloid · TRI_TRII
g21528.t1.1.5b2c7c7bAlkaloid · TRI_TRII
g2236.t1Alkaloid · TRI_TRII
g2236.t1.1.5b2c7c7dAlkaloid · TRI_TRII
g2236.t1.2.5b2c7c7dAlkaloid · TRI_TRII
g22525.t1Alkaloid · TRI_TRII
g22921.t1Alkaloid · TRI_TRII
g2293.t1Alkaloid · TRI_TRII
g2293.t1.1.5b2c7c7eAlkaloid · TRI_TRII
g2293.t1.2.5b2c7c7eAlkaloid · TRI_TRII
g23410.t1Alkaloid · TRI_TRII
g23851.t1Alkaloid · TRI_TRII
g24158.t1Alkaloid · TRI_TRII
g24158.t1.1.5b2c7c7cAlkaloid · TRI_TRII
g24158.t1.2.5b2c7c7cAlkaloid · TRI_TRII
g25688.t1Alkaloid · TRI_TRII
g2984.t1Alkaloid · TRI_TRII
g2984.t1.1.5b2c7c7fAlkaloid · TRI_TRII
g2990.t1Alkaloid · TRI_TRII
g4660.t1.1.5b2c7c77Alkaloid · TRI_TRII
g5074.t1.2.5b2c7c78Alkaloid · TRI_TRII
g5755.t1Alkaloid · TRI_TRII

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.