Species pathway expression context

Nepeta mussinii

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_mussinii.gene_tpm_log1p.tsv
Samples
7
Matrix genes
30,147
Expressed genes
24,957
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g3543.t1.4.5b2c7c80Alkaloid · COR
g3543.t1.5.5b2c7c80Alkaloid · COR
g4570.t1Alkaloid · COR
g4570.t1.1.5b2c7c81Alkaloid · COR
g4570.t1.2.5b2c7c81Alkaloid · COR
g4570.t1.3.5b2c7c81Alkaloid · COR
g4570.t1.4.5b2c7c81Alkaloid · COR
g830.t1Alkaloid · COR
g9688.t1Alkaloid · COR
g25351.t1Alkaloid · CYP719
g26341.t1Alkaloid · CYP719
g3483.t1.2.5b2c7c80Alkaloid · CYP719
g3483.t1.2.5b2c7c80.1.5b2c9584Alkaloid · CYP719
g6621.t1Alkaloid · CYP719
g8625.t1Alkaloid · CYP719
g8625.t1.1.5b2c7c7cAlkaloid · CYP719
g8625.t1.2.5b2c7c7cAlkaloid · CYP719
g8625.t1.3.5b2c7c7cAlkaloid · CYP719
g8625.t1.4.5b2c7c7cAlkaloid · CYP719
g11860.t1Alkaloid · CYP80B1
g16774.t1Alkaloid · G8O_G8H
g17344.t1Alkaloid · G8O_G8H
g18362.t1Alkaloid · G8O_G8H
g18794.t1Alkaloid · G8O_G8H
g18849.t1Alkaloid · G8O_G8H
g27508.t1Alkaloid · G8O_G8H
g553.t1Alkaloid · G8O_G8H
g10000.t1.1.5b2c7c7dAlkaloid · GES
g10000.t1.1.5b2c7c7d.1.5b2c9581Alkaloid · GES
g10043.t1Alkaloid · GES
g10684.t1Alkaloid · GES
g10692.t1_g10693.t1Alkaloid · GES
g12760.t1.1.5b2c7c7fAlkaloid · GES
g1369.t1Alkaloid · GES
g14013.t1Alkaloid · GES
g14224.t1Alkaloid · GES
g14224.t1.1.5b2c7c80Alkaloid · GES
g1613.t1Alkaloid · GES
g1613.t1.1.5b2c7c7bAlkaloid · GES
g1613.t1.2.5b2c7c7cAlkaloid · GES
g1615.t1Alkaloid · GES
g1615.t1.1.5b2c7c7cAlkaloid · GES
g1714.t1Alkaloid · GES
g17450.t1Alkaloid · GES
g17462.t1Alkaloid · GES
g19203.t1Alkaloid · GES
g20363.t1Alkaloid · GES
g21556.t1Alkaloid · GES
g22052.t1Alkaloid · GES
g22053.t1Alkaloid · GES

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.