Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

Pathway profile Candidate records

Matrix file: Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples: 12
Matrix genes: 18,549
Expressed genes: 18,334
Mapped candidate rows: 68
Measured / ND: 38 / 30

Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5

ND · Not detected

Unmapped candidate ID

Candidate	flower-1	flower-2	flower-3	leaf-1	leaf-2	leaf-3	root-1	root-2	root-3	stem-1	stem-2	stem-3
Smil00G0018520.1Alkaloid · LAMT`Smil00G0018520.v1.484`
Smil05G0014290.1Alkaloid · LAMT`Smil05G0014290.v1.484`
Smil06G0023010.1Alkaloid · LAMT`Smil06G0023010.v1.484`
Smil03G0008540.1Alkaloid · NCS`Smil03G0008540.v1.484`
Smil04G0015930.1Alkaloid · NCS`Smil04G0015930.v1.484`
Smil01G0006420.1Rosmarinic acid · PAL`Smil01G0006420.v1.484`
Smil02G0026130.1Rosmarinic acid · PAL`Smil02G0026130.v1.484`
Smil06G0027120.1Rosmarinic acid · PAL`Smil06G0027120.v1.484`
Smil00G0029680.1Terpenoid · TPS`Smil00G0029680.v1.484`
Smil00G0037600.1Terpenoid · TPS`Smil00G0037600.v1.484`
Smil00G0037790.1Terpenoid · TPS`Smil00G0037790.v1.484`
Smil01G0003850.1Terpenoid · TPS`Smil01G0003850.v1.484`
Smil01G0003890.1Terpenoid · TPS`Smil01G0003890.v1.484`
Smil01G0003910.1Terpenoid · TPS`Smil01G0003910.v1.484`
Smil01G0014610.1Terpenoid · TPS`Smil01G0014610.v1.484`
Smil01G0030080.1Terpenoid · TPS`Smil01G0030080.v1.484`
Smil02G0002570.1Terpenoid · TPS`Smil02G0002570.v1.484`
Smil02G0002580.1Terpenoid · TPS`Smil02G0002580.v1.484`
Smil03G0012370.1Terpenoid · TPS`Smil03G0012370.v1.484`
Smil03G0026570.1Terpenoid · TPS`Smil03G0026570.v1.484`
Smil03G0037800.1Terpenoid · TPS`Smil03G0037800.v1.484`
Smil03G0037810.1Terpenoid · TPS`Smil03G0037810.v1.484`
Smil04G0025320.1Terpenoid · TPS`Smil04G0025320.v1.484`
Smil04G0025360.1Terpenoid · TPS`Smil04G0025360.v1.484`
Smil04G0025880.1Terpenoid · TPS`Smil04G0025880.v1.484`
Smil04G0025900.1Terpenoid · TPS`Smil04G0025900.v1.484`
Smil05G0000850.1Terpenoid · TPS`Smil05G0000850.v1.484`
Smil05G0000870.1Terpenoid · TPS`Smil05G0000870.v1.484`
Smil05G0000880.1Terpenoid · TPS`Smil05G0000880.v1.484`
Smil05G0006480.1Terpenoid · TPS`Smil05G0006480.v1.484`
Smil05G0007470.1Terpenoid · TPS`Smil05G0007470.v1.484`
Smil05G0007500.1Terpenoid · TPS`Smil05G0007500.v1.484`
Smil05G0018210.1Terpenoid · TPS`Smil05G0018210.v1.484`
Smil05G0018260.1Terpenoid · TPS`Smil05G0018260.v1.484`
Smil06G0027580.1Terpenoid · TPS`Smil06G0027580.v1.484`
Smil07G0002220.1Terpenoid · TPS`Smil07G0002220.v1.484`
SmilGWHAOSJ000002410002080.1Terpenoid · TPS`SmilGWHAOSJ000002410002080.v1.484`
SmilGWHAOSJ000002410002090.1Terpenoid · TPS`SmilGWHAOSJ000002410002090.v1.484`
Smil00G0008460.1.v1.484Alkaloid · 7DLGT
Smil00G0008480.1.v1.484Alkaloid · 7DLGT
Smil00G0008490.1.v1.484Alkaloid · 7DLGT
Smil00G0027350.1.v1.484Alkaloid · 7DLGT
Smil00G0044110.1.v1.484Alkaloid · 7DLGT
Smil00G0044120.1.v1.484Alkaloid · 7DLGT
Smil00G0044130.1.v1.484Alkaloid · 7DLGT
Smil00G0044140.1.v1.484Alkaloid · 7DLGT
Smil00G0044150.1.v1.484Alkaloid · 7DLGT
Smil00G0044170.1.v1.484Alkaloid · 7DLGT
Smil00G0044180.1.v1.484Alkaloid · 7DLGT
Smil00G0044260.1.v1.484Alkaloid · 7DLGT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.