Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil03G0019180.1.v1.484Flavonoid · ANS_LDOX
Smil03G0019190.1.v1.484Flavonoid · ANS_LDOX
Smil03G0021910.1.v1.484Flavonoid · ANS_LDOX
Smil03G0023320.1.v1.484Flavonoid · ANS_LDOX
Smil03G0030280.1.v1.484Flavonoid · ANS_LDOX
Smil04G0002900.1.v1.484Flavonoid · ANS_LDOX
Smil04G0020380.1.v1.484Flavonoid · ANS_LDOX
Smil04G0021930.1.v1.484Flavonoid · ANS_LDOX
Smil04G0021940.1.v1.484Flavonoid · ANS_LDOX
Smil06G0003120.1.v1.484Flavonoid · ANS_LDOX
Smil06G0007320.1.v1.484Flavonoid · ANS_LDOX
Smil06G0015420.1.v1.484Flavonoid · ANS_LDOX
Smil06G0029530.1.v1.484Flavonoid · ANS_LDOX
SmilGWHAOSJ000002680002380.1.v1.484Flavonoid · ANS_LDOX
SmilGWHAOSJ000009460014730.1.v1.484Flavonoid · ANS_LDOX
Smil00G0004560.1.v1.484Flavonoid · C4H
Smil00G0005040.1.v1.484Flavonoid · C4H
Smil00G0005150.1.v1.484Flavonoid · C4H
Smil00G0012770.1.v1.484Flavonoid · C4H
Smil00G0014260.1.v1.484Flavonoid · C4H
Smil00G0023200.1.v1.484Flavonoid · C4H
Smil00G0028030.1.v1.484Flavonoid · C4H
Smil00G0036570.1.v1.484Flavonoid · C4H
Smil00G0042300.1.v1.484Flavonoid · C4H
Smil01G0009290.1.v1.484Flavonoid · C4H
Smil01G0012780.1.v1.484Flavonoid · C4H
Smil01G0016480.1.v1.484Flavonoid · C4H
Smil02G0008520.1.v1.484Flavonoid · C4H
Smil02G0014970.1.v1.484Flavonoid · C4H
Smil02G0014980.1.v1.484Flavonoid · C4H
Smil02G0018860.1.v1.484Flavonoid · C4H
Smil02G0019690.1.v1.484Flavonoid · C4H
Smil03G0001520.1.v1.484Flavonoid · C4H
Smil03G0004540.1.v1.484Flavonoid · C4H
Smil03G0005380.1.v1.484Flavonoid · C4H
Smil03G0016650.1.v1.484Flavonoid · C4H
Smil03G0022840.1.v1.484Flavonoid · C4H
Smil03G0038620.1.v1.484Flavonoid · C4H
Smil04G0014470.1.v1.484Flavonoid · C4H
Smil04G0019230.1.v1.484Flavonoid · C4H
Smil04G0020470.1.v1.484Flavonoid · C4H
Smil05G0019480.1.v1.484Flavonoid · C4H
Smil05G0019500.1.v1.484Flavonoid · C4H
Smil05G0019510.1.v1.484Flavonoid · C4H
Smil05G0019520.1.v1.484Flavonoid · C4H
Smil05G0019540.1.v1.484Flavonoid · C4H
Smil05G0019550.1.v1.484Flavonoid · C4H
Smil05G0019560.1.v1.484Flavonoid · C4H
Smil05G0019570.1.v1.484Flavonoid · C4H
Smil05G0029290.1.v1.484Flavonoid · C4H

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.