Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil05G0022700.1.v1.484Flavonoid · DFR
Smil05G0028830.1.v1.484Flavonoid · DFR
Smil05G0030430.1.v1.484Flavonoid · DFR
Smil06G0001010.1.v1.484Flavonoid · DFR
Smil06G0009820.1.v1.484Flavonoid · DFR
Smil06G0013020.1.v1.484Flavonoid · DFR
Smil06G0028050.1.v1.484Flavonoid · DFR
Smil07G0001100.1.v1.484Flavonoid · DFR
Smil07G0015630.1.v1.484Flavonoid · DFR
SmilGWHAOSJ000002420002120.1.v1.484Flavonoid · DFR
SmilGWHAOSJ000009240014380.1.v1.484Flavonoid · DFR
Smil00G0012820.1.v1.484Flavonoid · F35H_CYP75A
Smil01G0007460.1.v1.484Flavonoid · F35H_CYP75A
Smil02G0014200.1.v1.484Flavonoid · F35H_CYP75A
Smil02G0037860.1.v1.484Flavonoid · F35H_CYP75A
Smil04G0015410.1.v1.484Flavonoid · F35H_CYP75A
Smil05G0024800.1.v1.484Flavonoid · F35H_CYP75A
Smil06G0029700.1.v1.484Flavonoid · F35H_CYP75A
Smil00G0004180.1.v1.484Flavonoid · F3H
Smil00G0012180.1.v1.484Flavonoid · F3H
Smil00G0015180.1.v1.484Flavonoid · F3H
Smil00G0024630.1.v1.484Flavonoid · F3H
Smil00G0026290.1.v1.484Flavonoid · F3H
Smil00G0040810.1.v1.484Flavonoid · F3H
Smil00G0043180.1.v1.484Flavonoid · F3H
Smil01G0007000.1.v1.484Flavonoid · F3H
Smil01G0014160.1.v1.484Flavonoid · F3H
Smil01G0018660.1.v1.484Flavonoid · F3H
Smil02G0008850.1.v1.484Flavonoid · F3H
Smil02G0010840.1.v1.484Flavonoid · F3H
Smil02G0014690.1.v1.484Flavonoid · F3H
Smil02G0015420.1.v1.484Flavonoid · F3H
Smil02G0022360.1.v1.484Flavonoid · F3H
Smil02G0022730.1.v1.484Flavonoid · F3H
Smil02G0025130.1.v1.484Flavonoid · F3H
Smil02G0027210.1.v1.484Flavonoid · F3H
Smil02G0028790.1.v1.484Flavonoid · F3H
Smil02G0037340.1.v1.484Flavonoid · F3H
Smil03G0004520.1.v1.484Flavonoid · F3H
Smil03G0009600.1.v1.484Flavonoid · F3H
Smil03G0010830.1.v1.484Flavonoid · F3H
Smil03G0011930.1.v1.484Flavonoid · F3H
Smil03G0013220.1.v1.484Flavonoid · F3H
Smil03G0027320.1.v1.484Flavonoid · F3H
Smil03G0034000.1.v1.484Flavonoid · F3H
Smil03G0034010.1.v1.484Flavonoid · F3H
Smil03G0035720.1.v1.484Flavonoid · F3H
Smil04G0025000.1.v1.484Flavonoid · F3H
Smil05G0004710.1.v1.484Flavonoid · F3H
Smil05G0005550.1.v1.484Flavonoid · F3H

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.