Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil00G0027970.1.v1.484Steroid / sterol · CPD_CYP90A1
Smil02G0002010.1.v1.484Steroid / sterol · CPD_CYP90A1
Smil02G0021610.1.v1.484Steroid / sterol · CPD_CYP90A1
Smil03G0015080.1.v1.484Steroid / sterol · CPD_CYP90A1
Smil03G0020990.1.v1.484Steroid / sterol · CPI1
Smil07G0014610.1.v1.484Steroid / sterol · CPI1
Smil00G0003990.1.v1.484Steroid / sterol · CYP51G1
Smil00G0030500.1.v1.484Steroid / sterol · CYP51G1
Smil00G0031760.1.v1.484Steroid / sterol · CYP51G1
Smil00G0033860.1.v1.484Steroid / sterol · CYP51G1
Smil00G0040080.1.v1.484Steroid / sterol · CYP51G1
Smil01G0005740.1.v1.484Steroid / sterol · CYP51G1
Smil01G0010060.1.v1.484Steroid / sterol · CYP51G1
Smil01G0012440.1.v1.484Steroid / sterol · CYP51G1
Smil01G0012520.1.v1.484Steroid / sterol · CYP51G1
Smil01G0017320.1.v1.484Steroid / sterol · CYP51G1
Smil01G0030550.1.v1.484Steroid / sterol · CYP51G1
Smil02G0010400.1.v1.484Steroid / sterol · CYP51G1
Smil02G0016410.1.v1.484Steroid / sterol · CYP51G1
Smil02G0020310.1.v1.484Steroid / sterol · CYP51G1
Smil02G0020880.1.v1.484Steroid / sterol · CYP51G1
Smil02G0028440.1.v1.484Steroid / sterol · CYP51G1
Smil02G0035260.1.v1.484Steroid / sterol · CYP51G1
Smil03G0000430.1.v1.484Steroid / sterol · CYP51G1
Smil03G0003850.1.v1.484Steroid / sterol · CYP51G1
Smil03G0004750.1.v1.484Steroid / sterol · CYP51G1
Smil03G0012070.1.v1.484Steroid / sterol · CYP51G1
Smil03G0020190.1.v1.484Steroid / sterol · CYP51G1
Smil03G0036430.1.v1.484Steroid / sterol · CYP51G1
Smil03G0037260.1.v1.484Steroid / sterol · CYP51G1
Smil03G0039030.1.v1.484Steroid / sterol · CYP51G1
Smil04G0005550.1.v1.484Steroid / sterol · CYP51G1
Smil04G0007730.1.v1.484Steroid / sterol · CYP51G1
Smil04G0008300.1.v1.484Steroid / sterol · CYP51G1
Smil04G0010930.1.v1.484Steroid / sterol · CYP51G1
Smil05G0004910.1.v1.484Steroid / sterol · CYP51G1
Smil05G0007270.1.v1.484Steroid / sterol · CYP51G1
Smil05G0009750.1.v1.484Steroid / sterol · CYP51G1
Smil05G0009760.1.v1.484Steroid / sterol · CYP51G1
Smil05G0010050.1.v1.484Steroid / sterol · CYP51G1
Smil05G0013250.1.v1.484Steroid / sterol · CYP51G1
Smil05G0018670.1.v1.484Steroid / sterol · CYP51G1
Smil05G0019190.1.v1.484Steroid / sterol · CYP51G1
Smil05G0022090.1.v1.484Steroid / sterol · CYP51G1
Smil05G0025760.1.v1.484Steroid / sterol · CYP51G1
Smil05G0030880.1.v1.484Steroid / sterol · CYP51G1
Smil06G0006530.1.v1.484Steroid / sterol · CYP51G1
Smil06G0019550.1.v1.484Steroid / sterol · CYP51G1
Smil06G0026020.1.v1.484Steroid / sterol · CYP51G1
Smil06G0031240.1.v1.484Steroid / sterol · CYP51G1

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.