Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil04G0010810.1.v1.484Terpenoid · CYP76
Smil04G0013740.1.v1.484Terpenoid · CYP76
Smil04G0017570.1.v1.484Terpenoid · CYP76
Smil04G0023710.1.v1.484Terpenoid · CYP76
Smil04G0024560.1.v1.484Terpenoid · CYP76
Smil05G0001510.1.v1.484Terpenoid · CYP76
Smil05G0001520.1.v1.484Terpenoid · CYP76
Smil05G0010490.1.v1.484Terpenoid · CYP76
Smil05G0010500.1.v1.484Terpenoid · CYP76
Smil05G0016100.1.v1.484Terpenoid · CYP76
Smil05G0025460.1.v1.484Terpenoid · CYP76
Smil05G0032570.1.v1.484Terpenoid · CYP76
Smil06G0008770.1.v1.484Terpenoid · CYP76
Smil06G0015490.1.v1.484Terpenoid · CYP76
Smil06G0017990.1.v1.484Terpenoid · CYP76
Smil06G0018010.1.v1.484Terpenoid · CYP76
Smil06G0026150.1.v1.484Terpenoid · CYP76
Smil06G0028300.1.v1.484Terpenoid · CYP76
Smil06G0029710.1.v1.484Terpenoid · CYP76
Smil07G0002640.1.v1.484Terpenoid · CYP76
Smil07G0020000.1.v1.484Terpenoid · CYP76
SmilGWHAOSJ000003060002940.1.v1.484Terpenoid · CYP76
Smil06G0013740.1.v1.484Terpenoid · DXR
Smil00G0035430.1.v1.484Terpenoid · DXS
Smil02G0015950.1.v1.484Terpenoid · DXS
Smil04G0021010.1.v1.484Terpenoid · DXS
Smil04G0027800.1.v1.484Terpenoid · DXS
Smil05G0003510.1.v1.484Terpenoid · DXS
Smil05G0022430.1.v1.484Terpenoid · DXS
Smil05G0028960.1.v1.484Terpenoid · DXS
Smil06G0022760.1.v1.484Terpenoid · DXS
Smil06G0030650.1.v1.484Terpenoid · DXS
Smil07G0003040.1.v1.484Terpenoid · DXS
SmilGWHAOSJ000001500001050.1.v1.484Terpenoid · DXS
SmilGWHAOSJ000007210009900.1.v1.484Terpenoid · DXS
Smil00G0023850.1.v1.484Terpenoid · FPPS
Smil00G0027770.1.v1.484Terpenoid · FPPS
Smil00G0028760.1.v1.484Terpenoid · FPPS
Smil00G0030660.1.v1.484Terpenoid · FPPS
Smil00G0034060.1.v1.484Terpenoid · FPPS
Smil00G0040890.1.v1.484Terpenoid · FPPS
Smil01G0002190.1.v1.484Terpenoid · FPPS
Smil01G0005020.1.v1.484Terpenoid · FPPS
Smil01G0006860.1.v1.484Terpenoid · FPPS
Smil01G0010360.1.v1.484Terpenoid · FPPS
Smil01G0012190.1.v1.484Terpenoid · FPPS
Smil01G0018340.1.v1.484Terpenoid · FPPS
Smil01G0019560.1.v1.484Terpenoid · FPPS
Smil01G0019580.1.v1.484Terpenoid · FPPS
Smil02G0008450.1.v1.484Terpenoid · FPPS

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.