Pathway-family scientific record

16OMT

16OMT enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
40
Species with candidates
25
Species with assignments
25
Source assignments
40
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers40 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
40
Public candidate count
40
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 88 Available
Origanum vulgareNepetoideae · Origanum Stable locus 44 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 22 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 22 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 22 Available
Origanum majoranaNepetoideae · Origanum Stable locus 22 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 22 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 11 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 11 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 11 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 11 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 11 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 11 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 11 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 11 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 11 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 11 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 11 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 11 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 11 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 11 Available
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 11 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 11 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 11 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Cornutia pyramidataAlkaloid · 16OMTblast+hmm High 39.0%29.3
Stenogyne calaminthoidesAlkaloid · 16OMTblast+hmm High 35.1%19.4
Phlomoides rotataAlkaloid · 16OMTblast+hmm High 40.9%16.9
Salvia rosmarinusAlkaloid · 16OMTblast+hmm Medium 60.1%461.3
Pogostemon cablinAlkaloid · 16OMTblast+hmm Medium 59.9%374.0
Nepeta catariaAlkaloid · 16OMTblast+hmm Medium 53.9%317.5
Perilla frutescensAlkaloid · 16OMTblast+hmm Medium 57.8%304.2
Nepeta catariaAlkaloid · 16OMTblast+hmm Medium 47.4%277.1
Pogostemon cablinAlkaloid · 16OMTblast+hmm Medium 47.1%170.3
Origanum vulgareAlkaloid · 16OMTblast+hmm Medium 61.2%69.3
Pogostemon cablinAlkaloid · 16OMTblast+hmm Medium 44.7%68.9
Pogostemon cablinAlkaloid · 16OMTblast+hmm Medium 58.1%47.8
Stenogyne calaminthoidesAlkaloid · 16OMTblast+hmm Medium 49.1%47.2
Pogostemon cablinAlkaloid · 16OMTblast+hmm Medium 58.5%46.5
Pogostemon cablinAlkaloid · 16OMTblast+hmm Medium 61.7%34.4
Hyssopus officinalisAlkaloid · 16OMTblast+hmm Medium 59.1%30.3
Hyssopus officinalisAlkaloid · 16OMTblast+hmm Medium 35.9%21.3
Origanum majoranaAlkaloid · 16OMThmm Medium —42.3
Origanum vulgareAlkaloid · 16OMThmm Medium —36.6
Origanum vulgareAlkaloid · 16OMThmm Medium —23.6
Leonotis leonurusAlkaloid · 16OMThmm Medium —18.0
Scutellaria baicalensisAlkaloid · 16OMThmm Medium —18.0
Prunella vulgarisAlkaloid · 16OMThmm Medium —17.2
Pogostemon cablinAlkaloid · 16OMThmm Medium —17.1
Thymus quinquecostatusAlkaloid · 16OMThmm Medium —17.0
Thymus vulgarisAlkaloid · 16OMThmm Medium —17.0
Scutellaria barbataAlkaloid · 16OMThmm Medium —17.0
Pogostemon cablinAlkaloid · 16OMThmm Medium —16.8
Dracocephalum rupestreAlkaloid · 16OMThmm Medium —16.6
Rotheca myricoidesAlkaloid · 16OMThmm Medium —16.6
Origanum vulgareAlkaloid · 16OMThmm Medium —16.6
Ajuga decumbensAlkaloid · 16OMThmm Medium —16.4
Holmskioldia sanguineaAlkaloid · 16OMThmm Medium —16.3
Origanum majoranaAlkaloid · 16OMThmm Medium —16.3
Agastache foeniculumAlkaloid · 16OMThmm Medium —16.2
Ajuga reptansAlkaloid · 16OMThmm Medium —16.0
Lycopus americanusAlkaloid · 16OMThmm Medium —16.0
Ajuga decumbensAlkaloid · 16OMThmm Medium —16.0
Premna microphyllaAlkaloid · 16OMThmm Medium —15.9
Lavandula angustifoliaAlkaloid · 16OMThmm Medium —15.8