Pathway-family scientific record
IO
IO enzyme-family module
This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.
Stable locus
plantsmeAlkaloid-related biosynthesis
- Public candidate IDs
- 131
- Species with candidates
- 46
- Species with assignments
- 46
- Source assignments
- 131
- Gene-tree candidates
- 0
- Motif candidates
- 0
Evidence profile
Available evidence layers
◆Candidate identifiers131 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.
Comparative signature
Lamiaceae comparison fields
- Rate delta
- Not calculated
- Prevalence delta
- Not calculated
- Comparable source
- PlantSME family assignments
- Comparable source count
- 131
- Public candidate count
- 131
- Evidence mode
- plantsme
Species coverage
Assignment and locus coverage by species
Source family counts and public candidate identifiers are shown in separate columns.
Candidate records
Traceable candidate identifiers
Filter and inspect candidate identifiers for this family.