Pathway-family scientific record

LAMT

Loganic-acid O-methyltransferase family

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
204
Species with candidates
57
Species with assignments
55
Source assignments
204
Gene-tree candidates
95
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers204 public species-linked identifiers can be inspected.
GTGene-tree workflow95 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy11 clusters across 2 species; maximum cluster size 5.

Comparative signature

Lamiaceae comparison fields

Rate delta
0.085 · higher in Lamiaceae
Prevalence delta
0
Comparable source
PlantSME family assignments
Comparable source count
204
Public candidate count
204
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Ocimum basilicumNepetoideae · Ocimum Stable locus 436 Available
Origanum vulgareNepetoideae · Origanum Stable locus 720 No matrix
Pogostemon cablinLamioideae · Pogostemon Stable locus 712 Available
Tectona grandisTectonoideae · Tectona Stable locus 49 Available
Mentha longifoliaNepetoideae · Mentha Stable locus 39 Available
Salvia rosmarinusNepetoideae · Salvia Stable locus 27 Available
Isodon serraNepetoideae · Isodon Stable locus 66 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 66 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 55 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 55 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 25 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 15 Available
Mosla chinensisNepetoideae · Mosla Stable locus 44 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 34 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 33 No matrix
Lamium albumLamioideae · Lamium Stable locus 33 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 33 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 33 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 33 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 33 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 03 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 03 Available
Cornutia pyramidataPremnoideae · Cornutia Stable locus 22 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 22 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 22 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 22 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 22 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 22 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 22 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 22 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 22 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 22 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 12 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 12 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 11 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 11 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 11 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 11 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 11 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 11 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 11 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 11 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 11 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 11 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 11 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 11 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 11 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 11 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 11 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 11 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 11 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 11 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 11 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 11 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 11 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 11 No matrix
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Ocimum tenuiflorumAlkaloid · LAMTblast+hmm High 40.6%241.7
Teucrium marumAlkaloid · LAMTblast+hmm High 39.1%236.1
Perilla frutescensAlkaloid · LAMTblast+hmm High 40.5%172.6
Perilla frutescensAlkaloid · LAMTblast+hmm High 40.3%166.9
Ocimum tenuiflorumAlkaloid · LAMTblast+hmm High 38.0%164.4
Ocimum basilicumAlkaloid · LAMTblast+hmm High 48.6%155.6
Mentha x piperitaAlkaloid · LAMTblast+hmm High 40.5%145.2
Schizonepeta tenuifoliaAlkaloid · LAMTblast+hmm High 40.1%145.1
Ocimum tenuiflorumAlkaloid · LAMTblast+hmm High 37.4%130.5
Salvia hispanicaAlkaloid · LAMTblast+hmm High 37.0%127.8
Tectona grandisAlkaloid · LAMTblast+hmm High 45.7%121.8
Leonurus sibiricusAlkaloid · LAMTblast+hmm High 39.7%109.8
Perovskia atriplicifoliaAlkaloid · LAMTblast+hmm High 58.5%108.3
Isodon lophanthoidesAlkaloid · LAMTblast+hmm High 52.8%107.7
Plectranthus barbatusAlkaloid · LAMTblast+hmm High 51.2%104.4
Glechoma longitubaAlkaloid · LAMTblast+hmm High 32.8%101.8
Ocimum basilicumAlkaloid · LAMTblast+hmm High 36.1%101.0
Ocimum basilicumAlkaloid · LAMTblast+hmm High 46.0%97.5
Agastache rugosaAlkaloid · LAMTblast+hmm High 37.4%92.0
Perovskia atriplicifoliaAlkaloid · LAMTblast+hmm High 45.7%91.6
Petraeovitex bambusetoriumAlkaloid · LAMTblast+hmm High 47.1%87.0
Origanum vulgareAlkaloid · LAMTblast+hmm High 42.0%86.1
Salvia bowleyanaAlkaloid · LAMTblast+hmm High 38.8%85.1
Glechoma longitubaAlkaloid · LAMTblast+hmm High 31.9%84.1
Lamium albumAlkaloid · LAMTblast+hmm High 42.7%83.9
Tectona grandisAlkaloid · LAMTblast+hmm High 41.0%76.6
Ajuga decumbensAlkaloid · LAMTblast+hmm High 39.8%68.8
Isodon serraAlkaloid · LAMTblast+hmm High 37.1%68.6
Mosla chinensisAlkaloid · LAMTblast+hmm High 31.3%67.3
Mosla chinensisAlkaloid · LAMTblast+hmm High 32.3%66.0
Mosla chinensisAlkaloid · LAMTblast+hmm High 32.3%66.0
Mosla chinensisAlkaloid · LAMTblast+hmm High 32.3%66.0
Marrubium vulgareAlkaloid · LAMTblast+hmm High 67.9%61.6
Nepeta catariaAlkaloid · LAMTblast+hmm High 39.8%58.3
Salvia divinorumAlkaloid · LAMTblast+hmm High 41.0%56.9
Vitex agnus-castusAlkaloid · LAMTblast+hmm High 50.0%55.7
Teucrium chamaedrysAlkaloid · LAMTblast+hmm High 38.5%55.3
Perovskia atriplicifoliaAlkaloid · LAMTblast+hmm High 35.1%53.5
Lycopus americanusAlkaloid · LAMTblast+hmm High 50.0%51.3
Stenogyne calaminthoidesAlkaloid · LAMTblast+hmm High 42.1%50.7
Gmelina philippensisAlkaloid · LAMTblast+hmm High 51.6%50.2
Mentha longifoliaAlkaloid · LAMTblast+hmm High 39.6%49.3
Stenogyne calaminthoidesAlkaloid · LAMTblast+hmm High 44.2%49.0
Thymus vulgarisAlkaloid · LAMTblast+hmm High 57.6%48.3
Isodon serraAlkaloid · LAMTblast+hmm High 39.5%46.7
Drepanocaryum sewerzowiiAlkaloid · LAMTblast+hmm High 38.6%44.7
Ocimum basilicumAlkaloid · LAMTblast+hmm High 44.4%44.1
Vitex agnus-castusAlkaloid · LAMTblast+hmm High 47.6%43.5
Scutellaria barbataAlkaloid · LAMTblast+hmm High 43.1%42.5
Perovskia atriplicifoliaAlkaloid · LAMTblast+hmm High 52.9%42.0