Pathway-family scientific record

T16H

T16H enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
111
Species with candidates
45
Species with assignments
45
Source assignments
111
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers111 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
111
Public candidate count
111
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 3939 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 66 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 55 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 55 Available
Isodon lophanthoidesNepetoideae · Isodon Stable locus 33 No matrix
Isodon serraNepetoideae · Isodon Stable locus 33 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 33 Available
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 22 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 22 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 22 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 22 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 22 Available
Perilla frutescensNepetoideae · Perilla Stable locus 22 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 22 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 22 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 22 Available
Agastache foeniculumNepetoideae · Agastache Stable locus 11 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 11 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 11 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 11 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 11 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 11 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 11 No matrix
Lamium albumLamioideae · Lamium Stable locus 11 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 11 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 11 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 11 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 11 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 11 Available
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 11 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 11 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 11 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 11 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 11 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 11 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 11 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 11 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 11 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 11 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 11 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 11 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 11 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 11 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 11 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Teucrium chamaedrysAlkaloid · T16Hblast+hmm Medium 34.8%52.0
Teucrium chamaedrysAlkaloid · T16Hblast+hmm Medium 34.8%52.0
Teucrium chamaedrysAlkaloid · T16Hblast+hmm Medium 43.8%51.6
Teucrium chamaedrysAlkaloid · T16Hblast+hmm Medium 40.0%51.3
Teucrium chamaedrysAlkaloid · T16Hblast+hmm Medium 44.5%50.5
Pogostemon cablinAlkaloid · T16Hblast+hmm Medium 47.0%45.9
Clinopodium barosmumAlkaloid · T16Hblast+hmm Medium 47.8%42.7
Origanum vulgareAlkaloid · T16Hblast+hmm Medium 46.7%38.9
Glechoma longitubaAlkaloid · T16Hblast+hmm Medium 37.3%35.8
Glechoma longitubaAlkaloid · T16Hblast+hmm Medium 39.3%33.1
Salvia bowleyanaAlkaloid · T16Hblast+hmm Medium 29.5%33.0
Salvia rosmarinusAlkaloid · T16Hblast+hmm Medium 30.1%32.6
Isodon lophanthoidesAlkaloid · T16Hblast+hmm Medium 30.9%31.5
Isodon serraAlkaloid · T16Hblast+hmm Medium 30.9%31.5
Salvia hispanicaAlkaloid · T16Hblast+hmm Medium 30.1%31.1
Ajuga reptansAlkaloid · T16Hblast+hmm Medium 28.1%29.9
Ajuga decumbensAlkaloid · T16Hblast+hmm Medium 28.1%29.9
Glechoma longitubaAlkaloid · T16Hblast+hmm Medium 38.5%28.6
Salvia sclareaAlkaloid · T16Hblast+hmm Medium 32.0%27.9
Salvia splendensAlkaloid · T16Hblast+hmm Medium 30.5%27.7
Prostanthera lasianthosAlkaloid · T16Hblast+hmm Medium 32.0%27.0
Salvia rosmarinusAlkaloid · T16Hblast+hmm Medium 28.8%26.9
Salvia officinalisAlkaloid · T16Hblast+hmm Medium 26.3%26.8
Glechoma longitubaAlkaloid · T16Hblast+hmm Medium 28.3%26.5
Glechoma longitubaAlkaloid · T16Hblast+hmm Medium 44.0%26.3
Salvia rosmarinusAlkaloid · T16Hblast+hmm Medium 57.6%26.3
Isodon lophanthoidesAlkaloid · T16Hblast+hmm Medium 25.6%26.0
Lycopus americanusAlkaloid · T16Hblast+hmm Medium 24.8%25.5
Isodon serraAlkaloid · T16Hblast+hmm Medium 31.5%24.3
Isodon serraAlkaloid · T16Hblast+hmm Medium 25.6%24.3
Isodon lophanthoidesAlkaloid · T16Hblast+hmm Medium 35.8%24.2
Pogostemon cablinAlkaloid · T16Hblast+hmm Medium 47.5%23.3
Ocimum basilicumAlkaloid · T16Hblast+hmm Medium 62.1%21.0
Mentha longifoliaAlkaloid · T16Hblast+hmm Medium 68.6%19.1
Stenogyne calaminthoidesAlkaloid · T16Hblast+hmm Medium 44.6%19.0
Hyptis suaveolensAlkaloid · T16Hblast+hmm Medium 29.2%18.3
Ocimum basilicumAlkaloid · T16Hblast+hmm Medium 26.7%17.9
Ocimum basilicumAlkaloid · T16Hblast+hmm Medium 26.0%17.3
Teucrium marumAlkaloid · T16Hblast+hmm Medium 63.6%16.9
Glechoma hederaceaAlkaloid · T16Hblast Medium 75.0%—
Phlomoides rotataAlkaloid · T16Hblast Medium 41.9%—
Pogostemon cablinAlkaloid · T16Hblast Medium 30.2%—
Rotheca myricoidesAlkaloid · T16Hblast Medium 38.8%—
Leonotis leonurusAlkaloid · T16Hhmm Medium —32.7
Scutellaria barbataAlkaloid · T16Hhmm Medium —29.8
Lamium albumAlkaloid · T16Hhmm Medium —28.8
Agastache foeniculumAlkaloid · T16Hhmm Medium —26.2
Pogostemon cablinAlkaloid · T16Hhmm Medium —26.0
Leonurus japonicusAlkaloid · T16Hhmm Medium —23.6
Collinsonia canadensisAlkaloid · T16Hhmm Medium —22.5