Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

349 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
Pat_B09G105100.m1	Pogostemon cablin	Alkaloid · `ISY`	blast+hmm	High	67.5%	124.2
PHFR_c41532_g1_i1_len_365	Phlomis fruticosa	Alkaloid · `ISY`	blast+hmm	High	84.8%	120.6
PEBA_c30340_g1_i1_len_400	Petraeovitex bambusetorium	Alkaloid · `ISY`	blast+hmm	High	92.1%	116.3
evm.model.LG02.678	Clinopodium barosmum	Alkaloid · `ISY`	blast+hmm	High	36.4%	104.7
VIAG_c29303_g1_i2_len_446	Vitex agnus-castus	Alkaloid · `ISY`	blast+hmm	High	66.7%	98.6
TECA_c78816_g1_i1_len_270	Teucrium canadense	Alkaloid · `ISY`	blast+hmm	High	79.4%	98.4
CAame06G0006220.v1.94	Callicarpa americana	Alkaloid · `ISY`	blast+hmm	High	45.5%	94.4
Roff3497650398090	Salvia rosmarinus	Alkaloid · `ISY`	blast+hmm	High	49.6%	87.2
ROMY_c100548_g1_i1_len_257	Rotheca myricoides	Alkaloid · `ISY`	blast+hmm	High	56.1%	70.8
VIAG_c94445_g1_i1_len_509	Vitex agnus-castus	Alkaloid · `ISY`	blast+hmm	High	61.1%	62.6
PLBA_c9924_g1_i1_len_625	Plectranthus barbatus	Alkaloid · `ISY`	blast+hmm	High	31.8%	55.8
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_37.21.mRNA1	Stenogyne calaminthoides	Alkaloid · `ISY`	blast+hmm	High	69.6%	54.3
evm.model.ptg000008l.73	Isodon serra	Alkaloid · `ISY`	blast+hmm	High	83.3%	52.9
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_343.1.mRNA1	Stenogyne calaminthoides	Alkaloid · `ISY`	blast+hmm	Medium	87.8%	140.3
evm.model.Chr02.291	Callicarpa nudiflora	Alkaloid · `ISY`	blast+hmm	Medium	81.2%	135.8
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_5.1468.mRNA1	Stenogyne calaminthoides	Alkaloid · `ISY`	blast+hmm	Medium	52.2%	133.8
Pat_A09G127900.m1	Pogostemon cablin	Alkaloid · `ISY`	blast+hmm	Medium	92.2%	92.3
Teucrium_chamaedrys__Tcha124561	Teucrium chamaedrys	Alkaloid · `ISY`	blast+hmm	Medium	83.7%	85.2
CAame11G0024070.v1.94	Callicarpa americana	Alkaloid · `ISY`	blast+hmm	Medium	76.8%	68.9
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_26.283.mRNA1	Stenogyne calaminthoides	Alkaloid · `ISY`	blast+hmm	Medium	73.5%	51.8
tectona_grandis_Tg08g14960.t1	Tectona grandis	Alkaloid · `ISY`	blast+hmm	Medium	26.9%	50.2
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_37.22.mRNA1	Stenogyne calaminthoides	Alkaloid · `ISY`	blast+hmm	Medium	57.6%	32.9
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_39.1462.mRNA1	Stenogyne calaminthoides	Alkaloid · `ISY`	hmm	Medium	—	288.1
PEAT_c24142_g1_i1_len_1161	Perovskia atriplicifolia	Alkaloid · `ISY`	hmm	Medium	—	283.0
Roff10490062930	Salvia rosmarinus	Alkaloid · `ISY`	hmm	Medium	—	277.1
g14530.t1	Nepeta cataria	Alkaloid · `ISY`	hmm	Medium	—	276.8
Sbow07G0007380.1	Salvia bowleyana	Alkaloid · `ISY`	hmm	Medium	—	275.4
g18339.t1	Nepeta cataria	Alkaloid · `ISY`	hmm	Medium	—	272.6
g6070.t1	Nepeta mussinii	Alkaloid · `ISY`	hmm	Medium	—	271.1
MACO_g23912.t1	Marmoritis complanata	Alkaloid · `ISY`	hmm	Medium	—	271.0
MACO_g23892.t1	Marmoritis complanata	Alkaloid · `ISY`	hmm	Medium	—	270.1
DRSE_g11252.t1	Drepanocaryum sewerzowii	Alkaloid · `ISY`	hmm	Medium	—	268.7
384868.g97.t1	Ocimum basilicum	Alkaloid · `ISY`	hmm	Medium	—	267.8
evm.model.chr14.524	Prunella vulgaris	Alkaloid · `ISY`	hmm	Medium	—	267.7
Smil04G0024300.1.v1.484	Salvia miltiorrhiza	Alkaloid · `ISY`	hmm	Medium	—	263.1
GlLon_024021-T1	Glechoma longituba	Alkaloid · `ISY`	hmm	Medium	—	262.5
Dru_2G0034980.1	Dracocephalum rupestre	Alkaloid · `ISY`	hmm	Medium	—	258.1
Clgra_026815-T1	Clinopodium gracile	Alkaloid · `ISY`	hmm	Medium	—	119.6
LAAN_c110602_g1_i1_len_605	Lavandula angustifolia	Alkaloid · `ISY`	hmm	Medium	—	107.9
HYSU_c11484_g1_i2_len_378	Hyptis suaveolens	Alkaloid · `ISY`	hmm	Medium	—	90.0
Teucrium_chamaedrys__Tcha96014	Teucrium chamaedrys	Alkaloid · `ISY`	hmm	Medium	—	82.2
PLBA_c93634_g1_i1_len_305	Plectranthus barbatus	Alkaloid · `ISY`	hmm	Medium	—	70.9
ROMY_c87382_g1_i1_len_263	Rotheca myricoides	Alkaloid · `ISY`	hmm	Medium	—	61.8
WEFR_c119921_g1_i1_len_266	Westringia fruticosa	Alkaloid · `ISY`	hmm	Medium	—	52.2
COPY_c107567_g1_i1_len_281	Cornutia pyramidata	Alkaloid · `ISY`	hmm	Medium	—	44.9
GLHE_c20925_g1_i1_len_256	Glechoma hederacea	Alkaloid · `ISY`	hmm	Medium	—	33.7
COTO_c79711_g1_i1_len_490	Congea tomentosa	Alkaloid · `ISY`	hmm	Medium	—	27.1
COPY_c6899_g1_i1_len_283	Cornutia pyramidata	Alkaloid · `ISY`	hmm	Medium	—	25.1
PHFR_c49314_g1_i1_len_447	Phlomis fruticosa	Alkaloid · `ISY`	hmm	Medium	—	20.8