Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

1,300 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
BAPS_c41721_g2_i1_len_2348	Ballota pseudodictamnus	Alkaloid · `ODC`	blast+hmm	High	45.2%	298.1
MESP_c47701_g1_i1_len_2154	Mentha spicata	Alkaloid · `ODC`	blast+hmm	High	45.2%	298.1
ORMA_c48155_g1_i1_len_3720	Origanum majorana	Alkaloid · `ODC`	blast+hmm	High	45.2%	298.1
PHFR_c161654_g1_i1_len_314	Phlomis fruticosa	Alkaloid · `ODC`	blast+hmm	High	97.1%	209.0
LYAM_c90427_g1_i1_len_822	Lycopus americanus	Alkaloid · `ODC`	blast+hmm	High	50.4%	178.6
COCA_c48528_g1_i1_len_2771	Collinsonia canadensis	Alkaloid · `ODC`	blast+hmm	High	42.6%	168.5
THVU_c118202_g1_i1_len_786	Thymus vulgaris	Alkaloid · `ODC`	blast+hmm	High	45.2%	154.1
LAAL_c5463_g1_i1_len_688	Lamium album	Alkaloid · `ODC`	blast+hmm	High	45.9%	151.7
LAAL_c2929_g1_i2_len_1055	Lamium album	Alkaloid · `ODC`	blast+hmm	High	49.4%	135.5
HOSA_c53438_g1_i1_len_457	Holmskioldia sanguinea	Alkaloid · `ODC`	blast+hmm	High	51.6%	117.4
COCA_c31548_g1_i1_len_987	Collinsonia canadensis	Alkaloid · `ODC`	blast+hmm	High	50.0%	113.1
GMPH_c49284_g1_i1_len_362	Gmelina philippensis	Alkaloid · `ODC`	blast+hmm	High	52.6%	108.8
COPY_c95794_g1_i1_len_963	Cornutia pyramidata	Alkaloid · `ODC`	blast+hmm	High	41.2%	108.2
GLHE_c74641_g1_i1_len_457	Glechoma hederacea	Alkaloid · `ODC`	blast+hmm	High	42.8%	87.5
LECA_c50396_g1_i1_len_408	Leonurus cardiaca	Alkaloid · `ODC`	blast+hmm	High	44.8%	82.3
LAAL_c43320_g1_i1_len_333	Lamium album	Alkaloid · `ODC`	blast+hmm	High	53.6%	69.3
MAVU_c51338_g1_i1_len_311	Marrubium vulgare	Alkaloid · `ODC`	blast+hmm	High	44.5%	69.0
Es1A.G062800.t1	Elsholtzia splendens	Alkaloid · `ODC`	blast+hmm	High	83.3%	68.3
Es1B.G063000.t1	Elsholtzia splendens	Alkaloid · `ODC`	blast+hmm	High	83.3%	68.3
origanum_vulgare_507.g436.t1	Origanum vulgare	Alkaloid · `ODC`	blast+hmm	High	82.8%	67.6
Clgra_015183-T1	Clinopodium gracile	Alkaloid · `ODC`	blast+hmm	High	82.6%	67.4
MODI_c41756_g1_i1_len_1744	Monarda didyma	Alkaloid · `ODC`	blast+hmm	High	82.4%	66.9
MEPI_c62324_g1_i1_len_1724	Mentha x piperita	Alkaloid · `ODC`	blast+hmm	High	82.4%	66.7
ORMA_c21_g1_i1_len_2331	Origanum majorana	Alkaloid · `ODC`	blast+hmm	High	82.8%	66.7
MESP_c44068_g2_i1_len_1714	Mentha spicata	Alkaloid · `ODC`	blast+hmm	High	83.0%	66.6
COCA_c71196_g1_i1_len_1759	Collinsonia canadensis	Alkaloid · `ODC`	blast+hmm	High	82.5%	66.5
Mlonscaffold_6_length_375374740144860.1.v1.326	Mentha longifolia	Alkaloid · `ODC`	blast+hmm	High	83.4%	66.5
evm.model.LG02.2019	Clinopodium barosmum	Alkaloid · `ODC`	blast+hmm	High	83.1%	66.4
g11974.t1	Salvia sclarea	Alkaloid · `ODC`	blast+hmm	High	82.9%	66.2
MEOF_c41188_g1_i1_len_1783	Melissa officinalis	Alkaloid · `ODC`	blast+hmm	High	83.1%	65.9
LECA_c35031_g1_i1_len_1640	Leonurus cardiaca	Alkaloid · `ODC`	blast+hmm	High	85.7%	65.8
BAPS_c38444_g1_i1_len_1653	Ballota pseudodictamnus	Alkaloid · `ODC`	blast+hmm	High	84.2%	65.7
Mc4g27590.1	Mosla chinensis	Alkaloid · `ODC`	blast+hmm	High	83.3%	65.7
GWHPBJVA006434	Thymus quinquecostatus	Alkaloid · `ODC`	blast+hmm	High	83.0%	65.5
SAOF_c36466_g2_i1_len_1766	Salvia officinalis	Alkaloid · `ODC`	blast+hmm	High	83.3%	65.5
XP_041994890.1	Salvia splendens	Alkaloid · `ODC`	blast+hmm	High	83.0%	65.5
Smil02G0011010.1.v1.484	Salvia miltiorrhiza	Alkaloid · `ODC`	blast+hmm	High	82.9%	65.3
STOF_c26215_g1_i1_len_1710	Stachys officinalis	Alkaloid · `ODC`	blast+hmm	High	85.2%	65.2
THVU_c74367_g1_i1_len_2123	Thymus vulgaris	Alkaloid · `ODC`	blast+hmm	High	83.4%	65.2
PEAT_c36730_g1_i1_len_1830	Perovskia atriplicifolia	Alkaloid · `ODC`	blast+hmm	High	83.2%	64.9
LAAL_c55087_g1_i1_len_1667	Lamium album	Alkaloid · `ODC`	blast+hmm	High	85.2%	64.8
Roff24190317410	Salvia rosmarinus	Alkaloid · `ODC`	blast+hmm	High	83.0%	64.7
rna-gnl\|WGS:QFCC\|chr12_31818643_31822417.mrna1	Perilla frutescens	Alkaloid · `ODC`	blast+hmm	High	82.4%	64.7
rna-gnl\|WGS:QIYW\|chr08_31046901_31050675.mrna1	Perilla citriodora	Alkaloid · `ODC`	blast+hmm	High	82.4%	64.7
rna-gnl\|WGS:QIYW\|chr08_31046901_31050675.mrna1	Perilla frutescens var. hirtella	Alkaloid · `ODC`	blast+hmm	High	82.4%	64.7
LELE_c35185_g2_i1_len_1723	Leonotis leonurus	Alkaloid · `ODC`	blast+hmm	High	88.8%	64.6
KAL1558022.1	Salvia divinorum	Alkaloid · `ODC`	blast+hmm	High	83.0%	64.5
scutellaria_barbata_GWHPAOTP004205	Scutellaria barbata	Alkaloid · `ODC`	blast+hmm	High	83.4%	64.5
PEBA_c109252_g1_i1_len_1761	Petraeovitex bambusetorium	Alkaloid · `ODC`	blast+hmm	High	85.5%	64.1
Teucrium_chamaedrys__Tcha191254	Teucrium chamaedrys	Alkaloid · `ODC`	blast+hmm	High	84.3%	63.8