Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

1,778 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
COCA_c115567_g1_i1_len_308	Collinsonia canadensis	Alkaloid · `PYKS`	blast+hmm	High	62.7%	70.4
GWHPBJVA021054	Thymus quinquecostatus	Alkaloid · `PYKS`	blast+hmm	High	55.7%	68.0
MEPI_c80154_g1_i1_len_303	Mentha x piperita	Alkaloid · `PYKS`	blast+hmm	High	41.0%	65.6
Sbow01G0008830.1	Salvia bowleyana	Alkaloid · `PYKS`	blast+hmm	High	50.8%	59.8
Sch000023816	Schizonepeta tenuifolia	Alkaloid · `PYKS`	blast+hmm	High	40.5%	59.5
ocimum_sanctum_Ote100139260021	Ocimum tenuiflorum	Alkaloid · `PYKS`	blast+hmm	High	60.0%	49.4
SAOF_c35690_g8_i1_len_418	Salvia officinalis	Alkaloid · `PYKS`	blast+hmm	High	50.9%	48.9
Clgra_038444-T1	Clinopodium gracile	Alkaloid · `PYKS`	blast+hmm	High	31.7%	43.7
ocimum_sanctum_Ote100219520001	Ocimum tenuiflorum	Alkaloid · `PYKS`	blast+hmm	High	61.0%	43.0
731.g33.t1	Ocimum basilicum	Alkaloid · `PYKS`	blast+hmm	High	52.4%	29.5
ORMA_c48806_g2_i3_len_1539	Origanum majorana	Alkaloid · `PYKS`	blast+hmm	High	44.2%	27.8
383121.g14.t1	Ocimum basilicum	Alkaloid · `PYKS`	blast+hmm	High	47.1%	19.7
g29488.t1	Nepeta cataria	Alkaloid · `PYKS`	blast+hmm	Medium	63.0%	338.0
evm.model.LG04.390	Clinopodium barosmum	Alkaloid · `PYKS`	blast+hmm	Medium	51.2%	79.7
ocimum_sanctum_Ote100250790011	Ocimum tenuiflorum	Alkaloid · `PYKS`	blast+hmm	Medium	57.7%	64.6
ocimum_sanctum_Ote100239700001	Ocimum tenuiflorum	Alkaloid · `PYKS`	blast+hmm	Medium	55.0%	61.5
ocimum_sanctum_Ote100218430011	Ocimum tenuiflorum	Alkaloid · `PYKS`	blast+hmm	Medium	27.9%	55.9
BAPS_c22406_g1_i1_len_396	Ballota pseudodictamnus	Alkaloid · `PYKS`	blast+hmm	Medium	28.9%	52.9
origanum_vulgare_120143.g2.t1	Origanum vulgare	Alkaloid · `PYKS`	blast+hmm	Medium	46.2%	42.5
origanum_vulgare_425.g29.t1	Origanum vulgare	Alkaloid · `PYKS`	blast+hmm	Medium	44.6%	40.5
origanum_vulgare_798.g16.t1	Origanum vulgare	Alkaloid · `PYKS`	blast+hmm	Medium	46.2%	38.4
ocimum_sanctum_Ote100260980041	Ocimum tenuiflorum	Alkaloid · `PYKS`	blast+hmm	Medium	64.7%	31.5
454.g110.t1	Ocimum basilicum	Alkaloid · `PYKS`	blast+hmm	Medium	51.4%	31.3
PEAT_c12217_g1_i1_len_557	Perovskia atriplicifolia	Alkaloid · `PYKS`	blast+hmm	Medium	69.0%	29.6
XP_047939656.1	Salvia hispanica	Alkaloid · `PYKS`	blast+hmm	Medium	23.7%	26.8
evm.model.LG12.111	Clinopodium barosmum	Alkaloid · `PYKS`	blast+hmm	Medium	23.9%	25.4
384222.g87.t1	Ocimum basilicum	Alkaloid · `PYKS`	blast+hmm	Medium	44.9%	23.8
STOF_c49145_g2_i1_len_318	Stachys officinalis	Alkaloid · `PYKS`	blast+hmm	Medium	68.0%	22.9
PRMI_c13749_g1_i1_len_505	Premna microphylla	Alkaloid · `PYKS`	blast+hmm	Medium	26.4%	22.3
rna-gnl\|WGS:QFCC\|chr15_34531428_34532811.mrna1	Perilla frutescens	Alkaloid · `PYKS`	blast+hmm	Medium	23.7%	21.7
rna-gnl\|WGS:QIYW\|chr09_19689134_19690517.mrna1	Perilla citriodora	Alkaloid · `PYKS`	blast+hmm	Medium	23.7%	21.7
rna-gnl\|WGS:QIYW\|chr09_19689134_19690517.mrna1	Perilla frutescens var. hirtella	Alkaloid · `PYKS`	blast+hmm	Medium	23.7%	21.7
Mc6g19330.1	Mosla chinensis	Alkaloid · `PYKS`	blast+hmm	Medium	22.9%	20.8
Ms_c002g01038.1	Mosla soochowensis	Alkaloid · `PYKS`	blast+hmm	Medium	22.5%	20.8
VIAG_c15991_g1_i1_len_289	Vitex agnus-castus	Alkaloid · `PYKS`	blast+hmm	Medium	29.2%	16.8
PRMI_c79919_g1_i1_len_620	Premna microphylla	Alkaloid · `PYKS`	hmm	Medium	—	101.6
Ms_c025g00025.1	Mosla soochowensis	Alkaloid · `PYKS`	hmm	Medium	—	98.1
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_40.477.mRNA1	Stenogyne calaminthoides	Alkaloid · `PYKS`	hmm	Medium	—	89.8
ocimum_sanctum_Ote100139260011	Ocimum tenuiflorum	Alkaloid · `PYKS`	hmm	Medium	—	81.2
evm.model.LG20.1360	Clinopodium barosmum	Alkaloid · `PYKS`	hmm	Medium	—	55.6
MESP_c98329_g1_i1_len_306	Mentha spicata	Alkaloid · `PYKS`	hmm	Medium	—	54.8
382873.g2.t1	Ocimum basilicum	Alkaloid · `PYKS`	hmm	Medium	—	52.6
666.g13.t1	Ocimum basilicum	Alkaloid · `PYKS`	hmm	Medium	—	50.7
PLBA_c76503_g1_i1_len_327	Plectranthus barbatus	Alkaloid · `PYKS`	hmm	Medium	—	50.3
MEOF_c34060_g1_i1_len_340	Melissa officinalis	Alkaloid · `PYKS`	hmm	Medium	—	50.0
MAVU_c1073_g1_i1_len_252	Marrubium vulgare	Alkaloid · `PYKS`	hmm	Medium	—	49.8
LECA_c1511_g1_i1_len_582	Leonurus cardiaca	Alkaloid · `PYKS`	hmm	Medium	—	46.5
381291.g14.t1	Ocimum basilicum	Alkaloid · `PYKS`	hmm	Medium	—	46.0
CAame15G0017080.v1.94	Callicarpa americana	Alkaloid · `PYKS`	hmm	Medium	—	45.6
ocimum_sanctum_Ote100262010011	Ocimum tenuiflorum	Alkaloid · `PYKS`	hmm	Medium	—	41.7