Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

3,516 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
g5349.t2	Salvia sclarea	Alkaloid · `SGD`	hmm	Medium	—	72.0
Pat_A23G128700.m1	Pogostemon cablin	Alkaloid · `SGD`	hmm	Medium	—	71.4
Pat_A23G128700.m2	Pogostemon cablin	Alkaloid · `SGD`	hmm	Medium	—	71.4
Pat_B24G107700.m1	Pogostemon cablin	Alkaloid · `SGD`	hmm	Medium	—	71.4
g5349.t1	Salvia sclarea	Alkaloid · `SGD`	hmm	Medium	—	71.4
PHFR_c74314_g3_i1_len_1193	Phlomis fruticosa	Alkaloid · `SGD`	hmm	Medium	—	71.3
evm.model.LG05.794	Clinopodium barosmum	Alkaloid · `SGD`	hmm	Medium	—	71.1
XP_047953146.1	Salvia hispanica	Alkaloid · `SGD`	hmm	Medium	—	71.0
origanum_vulgare_539.g117.t1	Origanum vulgare	Alkaloid · `SGD`	hmm	Medium	—	70.9
PRMI_c38935_g1_i1_len_875	Premna microphylla	Alkaloid · `SGD`	hmm	Medium	—	70.8
THVU_c66535_g1_i1_len_907	Thymus vulgaris	Alkaloid · `SGD`	hmm	Medium	—	70.8
GWHPBJVA005501	Thymus quinquecostatus	Alkaloid · `SGD`	hmm	Medium	—	69.9
XP_042057280.1	Salvia splendens	Alkaloid · `SGD`	hmm	Medium	—	69.8
g3900.t1.1.5b2d4a26	Nepeta cataria	Alkaloid · `SGD`	hmm	Medium	—	69.7
Pat_B23G107600.m1	Pogostemon cablin	Alkaloid · `SGD`	hmm	Medium	—	69.6
Pat_B23G107600.m2	Pogostemon cablin	Alkaloid · `SGD`	hmm	Medium	—	69.6
ORMA_c34757_g1_i1_len_943	Origanum majorana	Alkaloid · `SGD`	hmm	Medium	—	69.2
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_43.923.mRNA1	Stenogyne calaminthoides	Alkaloid · `SGD`	hmm	Medium	—	69.1
THVU_c6121_g1_i1_len_1197	Thymus vulgaris	Alkaloid · `SGD`	hmm	Medium	—	68.6
CLBU_c33747_g1_i1_len_486	Clerodendrum bungei	Alkaloid · `SGD`	hmm	Medium	—	68.4
MODI_c29913_g1_i1_len_1197	Monarda didyma	Alkaloid · `SGD`	hmm	Medium	—	68.3
HYSU_c31225_g2_i2_len_850	Hyptis suaveolens	Alkaloid · `SGD`	hmm	Medium	—	68.2
KAL1565325.1	Salvia divinorum	Alkaloid · `SGD`	hmm	Medium	—	68.2
Teucrium_chamaedrys__Tcha47701	Teucrium chamaedrys	Alkaloid · `SGD`	hmm	Medium	—	67.9
Clgra_017367-T1	Clinopodium gracile	Alkaloid · `SGD`	hmm	Medium	—	67.8
Pat_A24G141000.m1	Pogostemon cablin	Alkaloid · `SGD`	hmm	Medium	—	67.7
evm.model.LG01.2287	Clinopodium barosmum	Alkaloid · `SGD`	hmm	Medium	—	67.4
evm.model.ptg000011l.576	Isodon serra	Alkaloid · `SGD`	hmm	Medium	—	67.4
evm.model.chr7.3460	Prunella vulgaris	Alkaloid · `SGD`	hmm	Medium	—	67.3
g1800.t1	Ajuga decumbens	Alkaloid · `SGD`	hmm	Medium	—	67.3
MEPI_c58891_g2_i1_len_968	Mentha x piperita	Alkaloid · `SGD`	hmm	Medium	—	67.1
ORMA_c32092_g1_i1_len_1379	Origanum majorana	Alkaloid · `SGD`	hmm	Medium	—	67.1
XP_047983322.1	Salvia hispanica	Alkaloid · `SGD`	hmm	Medium	—	67.0
evm.model.chr8.3609	Prunella vulgaris	Alkaloid · `SGD`	hmm	Medium	—	67.0
MEOF_c40800_g1_i1_len_817	Melissa officinalis	Alkaloid · `SGD`	hmm	Medium	—	66.9
Pat_A24G141000.m3	Pogostemon cablin	Alkaloid · `SGD`	hmm	Medium	—	66.9
TECA_c79856_g1_i1_len_1079	Teucrium canadense	Alkaloid · `SGD`	hmm	Medium	—	66.8
tectona_grandis_Tg08g17060.t1	Tectona grandis	Alkaloid · `SGD`	hmm	Medium	—	66.8
AJRE_c38246_g1_i1_len_1390	Ajuga reptans	Alkaloid · `SGD`	hmm	Medium	—	66.6
origanum_vulgare_125883.g325.t1	Origanum vulgare	Alkaloid · `SGD`	hmm	Medium	—	66.6
PEBA_c37418_g4_i1_len_756	Petraeovitex bambusetorium	Alkaloid · `SGD`	hmm	Medium	—	66.5
PLBA_c43304_g3_i1_len_904	Plectranthus barbatus	Alkaloid · `SGD`	hmm	Medium	—	66.5
CAame06G0001850.v1.94	Callicarpa americana	Alkaloid · `SGD`	hmm	Medium	—	66.4
LAAN_c50209_g1_i1_len_764	Lavandula angustifolia	Alkaloid · `SGD`	hmm	Medium	—	66.4
Teucrium_chamaedrys__Tcha113474	Teucrium chamaedrys	Alkaloid · `SGD`	hmm	Medium	—	66.3
Teucrium_chamaedrys__Tcha24256	Teucrium chamaedrys	Alkaloid · `SGD`	hmm	Medium	—	66.3
AJRE_c33708_g1_i1_len_807	Ajuga reptans	Alkaloid · `SGD`	hmm	Medium	—	66.2
evm.model.Chr02.87	Callicarpa nudiflora	Alkaloid · `SGD`	hmm	Medium	—	66.2
Sch000024141	Schizonepeta tenuifolia	Alkaloid · `SGD`	hmm	Medium	—	66.1
Teucrium_chamaedrys__Tcha66051	Teucrium chamaedrys	Alkaloid · `SGD`	hmm	Medium	—	66.0