Pathway-family scientific record

FNS

FNS enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Stable locus plantsmeFlavonoid biosynthesis
Public candidate IDs
68
Species with candidates
29
Species with assignments
29
Source assignments
68
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers68 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
68
Public candidate count
68
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Ocimum basilicumNepetoideae · Ocimum Stable locus 99 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 66 Available
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 55 No matrix
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 55 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 44 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 44 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 44 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 44 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 22 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 22 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 22 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 22 Available
Premna microphyllaPremnoideae · Premna Stable locus 22 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 22 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 11 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 11 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 11 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 11 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 11 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 11 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 11 No matrix
Isodon serraNepetoideae · Isodon Stable locus 11 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 11 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 11 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 11 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 11 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 11 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 11 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 11 Available

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Pogostemon cablinFlavonoid · FNSblast+hmm High 45.5%97.7
Stachys officinalisFlavonoid · FNSblast+hmm High 31.4%50.7
Leonurus sibiricusFlavonoid · FNSblast+hmm High 37.9%35.4
Cornutia pyramidataFlavonoid · FNSblast+hmm High 31.7%29.4
Teucrium chamaedrysFlavonoid · FNSblast+hmm High 31.7%18.5
Teucrium chamaedrysFlavonoid · FNSblast+hmm High 31.0%17.7
Pogostemon cablinFlavonoid · FNSblast+hmm Medium 43.8%92.2
Pogostemon cablinFlavonoid · FNSblast+hmm Medium 59.7%58.5
Callicarpa nudifloraFlavonoid · FNSblast+hmm Medium 23.8%49.1
Tectona grandisFlavonoid · FNSblast+hmm Medium 22.5%48.1
Callicarpa americanaFlavonoid · FNSblast+hmm Medium 23.9%47.4
Callicarpa americanaFlavonoid · FNSblast+hmm Medium 23.8%45.8
Callicarpa americanaFlavonoid · FNSblast+hmm Medium 23.8%45.6
Ballota pseudodictamnusFlavonoid · FNSblast+hmm Medium 65.9%30.8
Nepeta catariaFlavonoid · FNSblast+hmm Medium 34.7%30.5
Glechoma longitubaFlavonoid · FNSblast+hmm Medium 64.4%17.6
Pogostemon cablinFlavonoid · FNSblast+hmm Medium 33.8%15.0
Leonurus sibiricusFlavonoid · FNSblast+hmm Medium 41.7%11.6
Teucrium chamaedrysFlavonoid · FNSblast+hmm Medium 30.2%9.3
Ocimum basilicumFlavonoid · FNSblast Medium 35.5%—
Ocimum basilicumFlavonoid · FNSblast Medium 34.7%—
Isodon lophanthoidesFlavonoid · FNSblast Medium 34.6%—
Isodon lophanthoidesFlavonoid · FNSblast Medium 34.7%—
Isodon lophanthoidesFlavonoid · FNSblast Medium 37.8%—
Isodon lophanthoidesFlavonoid · FNSblast Medium 34.5%—
Ocimum basilicumFlavonoid · FNSblast Medium 33.9%—
Ocimum basilicumFlavonoid · FNSblast Medium 31.3%—
Ocimum basilicumFlavonoid · FNSblast Medium 35.2%—
Ocimum basilicumFlavonoid · FNSblast Medium 31.3%—
Ocimum basilicumFlavonoid · FNSblast Medium 31.0%—
Ocimum basilicumFlavonoid · FNSblast Medium 34.3%—
Ocimum basilicumFlavonoid · FNSblast Medium 32.0%—
Callicarpa americanaFlavonoid · FNSblast Medium 30.6%—
Collinsonia canadensisFlavonoid · FNSblast Medium 54.5%—
Collinsonia canadensisFlavonoid · FNSblast Medium 57.4%—
Collinsonia canadensisFlavonoid · FNSblast Medium 35.2%—
Collinsonia canadensisFlavonoid · FNSblast Medium 31.6%—
Collinsonia canadensisFlavonoid · FNSblast Medium 40.8%—
Cornutia pyramidataFlavonoid · FNSblast Medium 46.2%—
Congea tomentosaFlavonoid · FNSblast Medium 31.0%—
Gmelina philippensisFlavonoid · FNSblast Medium 61.2%—
Phlomoides rotataFlavonoid · FNSblast Medium 67.9%—
Premna microphyllaFlavonoid · FNSblast Medium 31.1%—
Premna microphyllaFlavonoid · FNSblast Medium 36.5%—
Rotheca myricoidesFlavonoid · FNSblast Medium 34.3%—
Rotheca myricoidesFlavonoid · FNSblast Medium 58.8%—
Salvia officinalisFlavonoid · FNSblast Medium 44.6%—
Stachys officinalisFlavonoid · FNSblast Medium 44.6%—
Scutellaria baicalensisFlavonoid · FNSblast Medium 44.6%—
Stenogyne calaminthoidesFlavonoid · FNSblast Medium 60.5%—