Pathway-family scientific record

4CL

4-coumarate--CoA ligase family

This module currently provides family-level assignment counts. Individual stable locus identifiers are not asserted unless listed separately.

Reference-only family countRosmarinic-acid biosynthesis
Public candidate IDs
0
Species with candidates
0
Species with assignments
17
Source assignments
1,824
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

□ᴿCandidate identifiersNo individual candidate identifiers are asserted for this module.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
Source-profile assignments
Comparable source count
1,824
Public candidate count
0
Evidence mode
family count

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Reference-only 2900 Available —
Salvia splendensNepetoideae · Salvia Reference-only 1570 No matrix —
Ocimum basilicumNepetoideae · Ocimum Reference-only 1480 Available —
Callicarpa americanaCallicarpoideae · Callicarpa Reference-only 1300 No matrix —
Salvia rosmarinusNepetoideae · Salvia Reference-only 1270 Available —
Phlomoides rotataLamioideae · Phlomoides Reference-only 1190 No matrix —
Nepeta catariaNepetoideae · Nepeta Reference-only 1060 Available —
Origanum vulgareNepetoideae · Origanum Reference-only 960 No matrix —
Salvia hispanicaNepetoideae · Salvia Reference-only 960 No matrix —
Salvia divinorumNepetoideae · Salvia Reference-only 920 No matrix —
Salvia bowleyanaNepetoideae · Salvia Reference-only 790 No matrix —
Tectona grandisTectonoideae · Tectona Reference-only 790 Available —
Salvia miltiorrhizaNepetoideae · Salvia Reference-only 660 Available —
Mentha longifoliaNepetoideae · Mentha Reference-only 630 Available —
Scutellaria barbataScutellarioideae · Scutellaria Reference-only 630 No matrix —
Perilla citriodoraNepetoideae · Perilla Reference-only 570 No matrix —
Nepeta mussiniiNepetoideae · Nepeta Reference-only 560 Available —

Candidate records

No stable locus records

The source release provides family-level assignment counts only. No locus IDs are invented.

Reference-only family summary

The bundled release provides family-level assignment counts but no stable candidate locus identifiers for this module.

View family matrix