Pathway-family scientific record

C4H

Cinnamate 4-hydroxylase family

This module currently provides family-level assignment counts. Individual stable locus identifiers are not asserted unless listed separately.

Reference-only family countRosmarinic-acid biosynthesis
Public candidate IDs
0
Species with candidates
0
Species with assignments
17
Source assignments
6,061
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

□ᴿCandidate identifiersNo individual candidate identifiers are asserted for this module.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy137 clusters across 4 species; maximum cluster size 15.

Comparative signature

Lamiaceae comparison fields

Rate delta
1.518 · higher in Lamiaceae
Prevalence delta
0
Comparable source
Source-profile assignments
Comparable source count
6,061
Public candidate count
0
Evidence mode
family count

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Ocimum basilicumNepetoideae · Ocimum Reference-only 1,0780 Available —
Callicarpa americanaCallicarpoideae · Callicarpa Reference-only 5980 No matrix —
Nepeta catariaNepetoideae · Nepeta Reference-only 5650 Available —
Origanum vulgareNepetoideae · Origanum Reference-only 4800 No matrix —
Tectona grandisTectonoideae · Tectona Reference-only 4750 Available —
Salvia rosmarinusNepetoideae · Salvia Reference-only 4390 Available —
Perilla citriodoraNepetoideae · Perilla Reference-only 3770 No matrix —
Scutellaria barbataScutellarioideae · Scutellaria Reference-only 3670 No matrix —
Salvia miltiorrhizaNepetoideae · Salvia Reference-only 3600 Available —
Salvia bowleyanaNepetoideae · Salvia Reference-only 3530 No matrix —
Nepeta mussiniiNepetoideae · Nepeta Reference-only 3470 Available —
Mentha longifoliaNepetoideae · Mentha Reference-only 3420 Available —
Pogostemon cablinLamioideae · Pogostemon Reference-only 940 Available —
Salvia splendensNepetoideae · Salvia Reference-only 640 No matrix —
Salvia hispanicaNepetoideae · Salvia Reference-only 460 No matrix —
Salvia divinorumNepetoideae · Salvia Reference-only 390 No matrix —
Phlomoides rotataLamioideae · Phlomoides Reference-only 370 No matrix —

Candidate records

No stable locus records

The source release provides family-level assignment counts only. No locus IDs are invented.

Reference-only family summary

The bundled release provides family-level assignment counts but no stable candidate locus identifiers for this module.

View family matrix