Pathway-family scientific record

DWF5

DWF5 enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Stable locus plantsmeSteroid and sterol biosynthesis
Public candidate IDs
32
Species with candidates
20
Species with assignments
20
Source assignments
32
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers32 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
32
Public candidate count
32
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 55 Available
Thymus vulgarisNepetoideae · Thymus Stable locus 44 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 22 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 22 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 22 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 22 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 22 Available
Gmelina philippensisPremnoideae · Gmelina Stable locus 11 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 11 No matrix
Lamium albumLamioideae · Lamium Stable locus 11 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 11 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 11 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 11 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 11 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 11 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 11 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 11 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 11 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 11 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Prostanthera lasianthosSteroid / sterol · DWF5blast+hmm High 88.0%981.3
Phlomis fruticosaSteroid / sterol · DWF5blast+hmm High 88.5%978.4
Clinopodium barosmumSteroid / sterol · DWF5blast+hmm High 87.0%972.3
Clinopodium barosmumSteroid / sterol · DWF5blast+hmm High 86.8%944.2
Lycopus americanusSteroid / sterol · DWF5blast+hmm High 88.3%931.2
Hyptis suaveolensSteroid / sterol · DWF5blast+hmm High 89.3%863.4
Phlomoides rotataSteroid / sterol · DWF5blast+hmm High 87.2%863.1
Petraeovitex bambusetoriumSteroid / sterol · DWF5blast+hmm High 85.9%855.0
Salvia rosmarinusSteroid / sterol · DWF5blast+hmm High 87.1%795.8
Pogostemon cablinSteroid / sterol · DWF5blast+hmm High 81.1%780.0
Pogostemon cablinSteroid / sterol · DWF5blast+hmm High 69.7%670.7
Pogostemon cablinSteroid / sterol · DWF5blast+hmm High 77.7%461.8
Salvia rosmarinusSteroid / sterol · DWF5blast+hmm High 60.2%300.0
Pogostemon cablinSteroid / sterol · DWF5blast+hmm High 70.7%172.4
Pogostemon cablinSteroid / sterol · DWF5blast+hmm High 61.2%119.4
Origanum majoranaSteroid / sterol · DWF5blast+hmm High 38.6%95.5
Salvia divinorumSteroid / sterol · DWF5blast+hmm High 77.8%82.7
Mentha spicataSteroid / sterol · DWF5blast+hmm High 35.8%69.1
Marmoritis complanataSteroid / sterol · DWF5blast+hmm Medium 68.8%28.0
Glechoma hederaceaSteroid / sterol · DWF5blast Medium 44.0%—
Glechoma hederaceaSteroid / sterol · DWF5blast Medium 45.5%—
Lamium albumSteroid / sterol · DWF5blast Medium 70.4%—
Plectranthus barbatusSteroid / sterol · DWF5blast Medium 31.7%—
Thymus vulgarisSteroid / sterol · DWF5blast Medium 66.7%—
Mosla soochowensisSteroid / sterol · DWF5hmm Medium —176.0
Thymus vulgarisSteroid / sterol · DWF5hmm Medium —71.6
Thymus vulgarisSteroid / sterol · DWF5hmm Medium —56.2
Gmelina philippensisSteroid / sterol · DWF5hmm Medium —46.7
Cornutia pyramidataSteroid / sterol · DWF5hmm Medium —42.5
Phlomis fruticosaSteroid / sterol · DWF5hmm Medium —21.3
Thymus vulgarisSteroid / sterol · DWF5hmm Medium —17.8
Cornutia pyramidataSteroid / sterol · DWF5hmm Medium —15.7