Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g21112.t1.1.5b2d4a26Alkaloid · NMT
g21112.t1.2.5b2d4a26Alkaloid · NMT
g21112.t1.3.5b2d4a26Alkaloid · NMT
g21112.t1.4.5b2d4a26Alkaloid · NMT
g22786.t1Alkaloid · NMT
g2697.t1Alkaloid · NMT
g2697.t1.1.5b2d4a34Alkaloid · NMT
g2697.t1.2.5b2d4a34Alkaloid · NMT
g2697.t1.3.5b2d4a34Alkaloid · NMT
g27328.t1Alkaloid · NMT
g28934.t1Alkaloid · NMT
g28934.t1.1.5b2d4a2bAlkaloid · NMT
g28934.t1.2.5b2d4a2bAlkaloid · NMT
g29514.t1Alkaloid · NMT
g29514.t1.1.5b2d4a2bAlkaloid · NMT
g30613.t1Alkaloid · NMT
g30673.t1Alkaloid · NMT
g30673.t1.1.5b2d4a2cAlkaloid · NMT
g33443.t1Alkaloid · NMT
g33443.t1.1.5b2d4a2eAlkaloid · NMT
g33443.t1.2.5b2d4a2eAlkaloid · NMT
g33443.t1.3.5b2d4a2eAlkaloid · NMT
g35104.t1Alkaloid · NMT
g35472.t1Alkaloid · NMT
g35472.t1.1.5b2d4a2fAlkaloid · NMT
g36205.t1Alkaloid · NMT
g36205.t1.1.5b2d4a2fAlkaloid · NMT
g36205.t1.2.5b2d4a2fAlkaloid · NMT
g36205.t1.3.5b2d4a2fAlkaloid · NMT
g42614.t1Alkaloid · NMT
g42614.t1.1.5b2d4a33Alkaloid · NMT
g42897.t1Alkaloid · NMT
g43159.t1Alkaloid · NMT
g43159.t1.1.5b2d4a34Alkaloid · NMT
g43461.t1Alkaloid · NMT
g43461.t1.1.5b2d4a34Alkaloid · NMT
g43461.t1.2.5b2d4a34Alkaloid · NMT
g43461.t1.4.5b2d4a34Alkaloid · NMT
g44545.t1Alkaloid · NMT
g45776.t1Alkaloid · NMT
g5887.t1Alkaloid · NMT
g5887.t1.1.5b2d4a2aAlkaloid · NMT
g5887.t1.2.5b2d4a2aAlkaloid · NMT
g5887.t1.3.5b2d4a2aAlkaloid · NMT
g7475.t1Alkaloid · NMT
g10864.t1Alkaloid · ODC
g12002.t1Alkaloid · ODC
g12883.t1Alkaloid · ODC
g134.t1Alkaloid · ODC
g1451.t1Alkaloid · ODC

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.