Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g978.t1Alkaloid · PYKS
g979.t1Alkaloid · PYKS
g10991.t1Alkaloid · SGD
g12953.t1Alkaloid · SGD
g12953.t1.1.5b2d4a32Alkaloid · SGD
g12953.t1.2.5b2d4a32Alkaloid · SGD
g14199.t1Alkaloid · SGD
g14199.t1.3.5b2d4a33Alkaloid · SGD
g16282.t1Alkaloid · SGD
g19035.t1Alkaloid · SGD
g20205.t1Alkaloid · SGD
g20205.t1.1.5b2d4a26Alkaloid · SGD
g20707.t1Alkaloid · SGD
g20707.t1.1.5b2d4a26Alkaloid · SGD
g2073.t1Alkaloid · SGD
g2073.t1.1.5b2d4a32Alkaloid · SGD
g24475.t1Alkaloid · SGD
g25306.t1Alkaloid · SGD
g27009.t1Alkaloid · SGD
g27599.t1Alkaloid · SGD
g28786.t1Alkaloid · SGD
g28986.t1Alkaloid · SGD
g31235.2.t1Alkaloid · SGD
g31934.t1Alkaloid · SGD
g32721.t1Alkaloid · SGD
g32721.t1.1.5b2d4a2dAlkaloid · SGD
g32721.t1.2.5b2d4a2dAlkaloid · SGD
g32721.t1.3.5b2d4a2dAlkaloid · SGD
g32721.t1.4.5b2d4a2dAlkaloid · SGD
g34610.t1Alkaloid · SGD
g38873.t1Alkaloid · SGD
g38873.t1.1.5b2d4a31Alkaloid · SGD
g3900.t1Alkaloid · SGD
g3900.t1.1.5b2d4a26Alkaloid · SGD
g39630.t1Alkaloid · SGD
g39630.t1.1.5b2d4a31Alkaloid · SGD
g41487.t1Alkaloid · SGD
g41488.t1Alkaloid · SGD
g4236.t1Alkaloid · SGD
g4237.t1Alkaloid · SGD
g43415.t1Alkaloid · SGD
g45182.t1_g45183.t1Alkaloid · SGD
g45182.t1_g45183.t1.1.5b2d6ae3Alkaloid · SGD
g47762.t1Alkaloid · SGD
g52140.t1Alkaloid · SGD
g52140.t1.1.5b2d4a2bAlkaloid · SGD
g52140.t1.2.5b2d4a2bAlkaloid · SGD
g52140.t1.3.5b2d4a2bAlkaloid · SGD
g52140.t1.4.5b2d4a2bAlkaloid · SGD
g52140.t1.5.5b2d4a2bAlkaloid · SGD

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.