Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g9827.t1Alkaloid · SGD
g9983.t1Alkaloid · SGD
g12929.t1Alkaloid · SLS
g13233.t1.2.5b2d4a33Alkaloid · SLS
g19833.t1Alkaloid · SLS
g19833.t1.1.5b2d4a25Alkaloid · SLS
g19833.t1.2.5b2d4a25Alkaloid · SLS
g20967.t1Alkaloid · SLS
g20967.t1.1.5b2d4a26Alkaloid · SLS
g20967.t1.2.5b2d4a26Alkaloid · SLS
g20967.t1.3.5b2d4a26Alkaloid · SLS
g21109.t1.1.5b2d4a26Alkaloid · SLS
g25566.t1.1.5b2d4a29Alkaloid · SLS
g31257.t1Alkaloid · SLS
g31257.t1.1.5b2d4a2cAlkaloid · SLS
g31257.t1.2.5b2d4a2cAlkaloid · SLS
g31257.t1.3.5b2d4a2cAlkaloid · SLS
g31257.t1.4.5b2d4a2cAlkaloid · SLS
g5100.t1.1.5b2d4a29Alkaloid · SLS
g11015.t1Alkaloid · STR
g11585.t1Alkaloid · STR
g11915.t1Alkaloid · STR
g16389.t1Alkaloid · STR
g16389.t1.1.5b2d4a23Alkaloid · STR
g16389.t1.2.5b2d4a23Alkaloid · STR
g16389.t1.3.5b2d4a23Alkaloid · STR
g16389.t1.4.5b2d4a23Alkaloid · STR
g16389.t1.5.5b2d4a23Alkaloid · STR
g16389.t1.6.5b2d4a23Alkaloid · STR
g17688.t1Alkaloid · STR
g18975.t1Alkaloid · STR
g18977.t1Alkaloid · STR
g1924.t1Alkaloid · STR
g1925.t1Alkaloid · STR
g19330.t1Alkaloid · STR
g19330.t1.1.5b2d4a25Alkaloid · STR
g19722.t1Alkaloid · STR
g20596.t1Alkaloid · STR
g21213.t1_g21214.t1Alkaloid · STR
g21578.t1Alkaloid · STR
g22316.t1Alkaloid · STR
g22316.t1.1.5b2d4a27Alkaloid · STR
g22317.t1Alkaloid · STR
g22695.t1Alkaloid · STR
g2609.t1Alkaloid · STR
g2609.t1.1.5b2d4a34Alkaloid · STR
g2611.t1Alkaloid · STR
g26907.t1Alkaloid · STR
g29144.t1Alkaloid · STR
g29146.t1Alkaloid · STR

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.