Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g33902.t1.1.5b2d4a2eAlkaloid · TRI_TRII
g33902.t1.2.5b2d4a2eAlkaloid · TRI_TRII
g33902.t1.2.5b2d4a2e.1.5b2d6aefAlkaloid · TRI_TRII
g33902.t1.3.5b2d4a2eAlkaloid · TRI_TRII
g34021.t1Alkaloid · TRI_TRII
g40156.t1Alkaloid · TRI_TRII
g40851.t1Alkaloid · TRI_TRII
g41483.t1.1.5b2d4a33Alkaloid · TRI_TRII
g41578.t1Alkaloid · TRI_TRII
g43618.t1Alkaloid · TRI_TRII
g43621.t1Alkaloid · TRI_TRII
g44864.t1Alkaloid · TRI_TRII
g44864.t1.1.5b2d4a23Alkaloid · TRI_TRII
g44864.t1.2.5b2d4a23Alkaloid · TRI_TRII
g44864.t1.3.5b2d4a23Alkaloid · TRI_TRII
g44864.t1.4.5b2d4a23Alkaloid · TRI_TRII
g45454.t1Alkaloid · TRI_TRII
g46504.t1Alkaloid · TRI_TRII
g46504.t1.1.5b2d4a24Alkaloid · TRI_TRII
g46504.t1.2.5b2d4a24Alkaloid · TRI_TRII
g46504.t1.3.5b2d4a24Alkaloid · TRI_TRII
g47345.t1Alkaloid · TRI_TRII
g50403.t1Alkaloid · TRI_TRII
g50576.t1Alkaloid · TRI_TRII
g50576.t1.1.5b2d4a28Alkaloid · TRI_TRII
g50718.t1Alkaloid · TRI_TRII
g5675.t1Alkaloid · TRI_TRII
g8178.t1Alkaloid · TRI_TRII
g8178.t1.1.5b2d4a2dAlkaloid · TRI_TRII
g8436.t1Alkaloid · TRI_TRII
g8481.t1_g8482.t1Alkaloid · TRI_TRII
g10294.t1Flavonoid · 4CL
g10426.t1Flavonoid · 4CL
g10645.t1Flavonoid · 4CL
g11891.t1Flavonoid · 4CL
g12241.t1Flavonoid · 4CL
g12241.t1.1.5b2d4a32Flavonoid · 4CL
g16808.t1Flavonoid · 4CL
g18799.t1Flavonoid · 4CL
g19353.t1Flavonoid · 4CL
g19455.t1Flavonoid · 4CL
g20353.t1Flavonoid · 4CL
g21689.t1Flavonoid · 4CL
g22340.t1Flavonoid · 4CL
g22341.t1Flavonoid · 4CL
g22360.t1Flavonoid · 4CL
g23705.t1Flavonoid · 4CL
g23705.t1.1.5b2d4a28Flavonoid · 4CL
g25024.t1Flavonoid · 4CL
g25028.t1Flavonoid · 4CL

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.