Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g29146.t1.1.5b2d4a2bAlkaloid · STR
g30238.t1Alkaloid · STR
g36965.t1Alkaloid · STR
g37666.t1Alkaloid · STR
g3791.t1Alkaloid · STR
g41975.t1Alkaloid · STR
g44338.t1Alkaloid · STR
g44338.t1.1.5b2d4a35Alkaloid · STR
g49059.t1Alkaloid · STR
g49109.t1Alkaloid · STR
g49272.t1Alkaloid · STR
g49273.t1Alkaloid · STR
g49273.t1.1.5b2d4a26Alkaloid · STR
g49273.t1.2.5b2d4a26Alkaloid · STR
g52467.t1Alkaloid · STR
g6701.t1Alkaloid · STR
g8074.t1.1.5b2d4a2d.2.5b2d6aeeAlkaloid · STR
g8370.t1Alkaloid · STR
g9721.t1Alkaloid · STR
g26404.t1Alkaloid · T16H
g26322.t1Alkaloid · T3O
g12112.t1.1.5b2d4a32Alkaloid · TDC
g22374.t1Alkaloid · TDC
g22374.t1.1.5b2d4a27Alkaloid · TDC
g23722.t1Alkaloid · TDC
g23722.t1.1.5b2d4a28Alkaloid · TDC
g23722.t1.2.5b2d4a28Alkaloid · TDC
g23722.t1.3.5b2d4a28Alkaloid · TDC
g23722.t1.4.5b2d4a28Alkaloid · TDC
g44784.t1_g44785.t1Alkaloid · TDC
g46321.t1Alkaloid · TDC
g11444.t1Alkaloid · TRI_TRII
g11982.t1Alkaloid · TRI_TRII
g12042.t1Alkaloid · TRI_TRII
g13684.t1Alkaloid · TRI_TRII
g15187.t1Alkaloid · TRI_TRII
g15187.t1.1.5b2d4a34Alkaloid · TRI_TRII
g15339.t1Alkaloid · TRI_TRII
g15511.t1Alkaloid · TRI_TRII
g16132.t1Alkaloid · TRI_TRII
g16664.t1.1.5b2d4a23Alkaloid · TRI_TRII
g16664.t1.2.5b2d4a23Alkaloid · TRI_TRII
g17651.t1Alkaloid · TRI_TRII
g17651.t1.2.5b2d4a24Alkaloid · TRI_TRII
g2876.t1Alkaloid · TRI_TRII
g29345.t1Alkaloid · TRI_TRII
g31041.t1Alkaloid · TRI_TRII
g31041.t1.1.5b2d4a2cAlkaloid · TRI_TRII
g33700.t1Alkaloid · TRI_TRII
g33902.t1Alkaloid · TRI_TRII

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.