Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g9109.t1Alkaloid · 7DLGT
g9110.t1Alkaloid · 7DLGT
g10216.t1Alkaloid · 7DLH
g10216.t1.1.5b2d4a30Alkaloid · 7DLH
g10216.t1.2.5b2d4a30Alkaloid · 7DLH
g10216.t1.3.5b2d4a30Alkaloid · 7DLH
g10216.t1.4.5b2d4a30Alkaloid · 7DLH
g16528.t1Alkaloid · 7DLH
g16528.t1.1.5b2d4a23Alkaloid · 7DLH
g16528.t1.2.5b2d4a23Alkaloid · 7DLH
g19869.t1Alkaloid · 7DLH
g20232.t1.1.5b2d4a26Alkaloid · 7DLH
g22553.t1.1.5b2d4a27Alkaloid · 7DLH
g24883.t1Alkaloid · 7DLH
g25824.t1Alkaloid · 7DLH
g25916.t1Alkaloid · 7DLH
g25970.t1Alkaloid · 7DLH
g27970.t1Alkaloid · 7DLH
g28016.t1Alkaloid · 7DLH
g30162.t1Alkaloid · 7DLH
g30766.t1Alkaloid · 7DLH
g38126.t1Alkaloid · 7DLH
g40437.t1Alkaloid · 7DLH
g41853.t1Alkaloid · 7DLH
g44070.t1Alkaloid · 7DLH
g46302.t1Alkaloid · 7DLH
g46302.t1.1.5b2d4a24Alkaloid · 7DLH
g46302.t1.2.5b2d4a24Alkaloid · 7DLH
g46302.t1.5.5b2d4a24Alkaloid · 7DLH
g46302.t1.6.5b2d4a24Alkaloid · 7DLH
g6261.t1.2.5b2d4a2bAlkaloid · 7DLH
g6261.t1.3.5b2d4a2bAlkaloid · 7DLH
g7095.t1Alkaloid · 7DLH
g7114.t1Alkaloid · 7DLH
g13668.t1Alkaloid · 8HGO
g13668.t1.1.5b2d4a33Alkaloid · 8HGO
g21485.t1Alkaloid · 8HGO
g21486.t1Alkaloid · 8HGO
g21486.t1.1.5b2d4a27Alkaloid · 8HGO
g21486.t1.1.5b2d4a27.1.5b2d6ae7Alkaloid · 8HGO
g21678.t1Alkaloid · 8HGO
g21678.t1.1.5b2d4a27Alkaloid · 8HGO
g21678.t1.2.5b2d4a27Alkaloid · 8HGO
g21678.t1.3.5b2d4a27Alkaloid · 8HGO
g21679.t1Alkaloid · 8HGO
g21679.t1.1.5b2d4a27Alkaloid · 8HGO
g21679.t1.2.5b2d4a27Alkaloid · 8HGO
g21679.t1.3.5b2d4a27Alkaloid · 8HGO
g21679.t1.4.5b2d4a27Alkaloid · 8HGO
g21679.t1.5.5b2d4a27Alkaloid · 8HGO

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.