Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g21679.t1.5.5b2d4a27.1.5b2d6ae7Alkaloid · 8HGO
g21679.t1.6.5b2d4a27Alkaloid · 8HGO
g21679.t1.7.5b2d4a27Alkaloid · 8HGO
g22739.2.t1Alkaloid · 8HGO
g23539.t1Alkaloid · 8HGO
g26284.t1Alkaloid · 8HGO
g26284.t1.1.5b2d4a2aAlkaloid · 8HGO
g26284.t1.2.5b2d4a2aAlkaloid · 8HGO
g26284.t1.3.5b2d4a2aAlkaloid · 8HGO
g26285.t1Alkaloid · 8HGO
g26286.t1Alkaloid · 8HGO
g28389.t1Alkaloid · 8HGO
g29917.t1_g29918.t1Alkaloid · 8HGO
g29917.t1_g29918.t1.1.5b2d6aecAlkaloid · 8HGO
g29917.t1_g29918.t1.2.5b2d6aecAlkaloid · 8HGO
g29917.t1_g29918.t1.3.5b2d6aecAlkaloid · 8HGO
g29917.t1_g29918.t1.4.5b2d6aecAlkaloid · 8HGO
g30053.t1Alkaloid · 8HGO
g30053.t1.1.5b2d4a2cAlkaloid · 8HGO
g36588.t1Alkaloid · 8HGO
g40261.t1Alkaloid · 8HGO
g40261.t1.1.5b2d4a32Alkaloid · 8HGO
g47190.t1Alkaloid · 8HGO
g47190.t1.1.5b2d4a25Alkaloid · 8HGO
g47190.t1.2.5b2d4a25Alkaloid · 8HGO
g47190.t1.2.5b2d4a25.1.5b2d6ae5Alkaloid · 8HGO
g47190.t1.2.5b2d4a25.2.5b2d6ae5Alkaloid · 8HGO
g47190.t1.2.5b2d4a25.3.5b2d6ae5Alkaloid · 8HGO
g48031.t1Alkaloid · 8HGO
g48031.t1.1.5b2d4a25Alkaloid · 8HGO
g48031.t1.2.5b2d4a25Alkaloid · 8HGO
g49759.t1Alkaloid · 8HGO
g52872.t1.2.5b2d4a2dAlkaloid · 8HGO
g7364.t1Alkaloid · 8HGO
g10016.t1Alkaloid · ADC
g26884.t1Alkaloid · ADC
g26884.t1.1.5b2d4a2aAlkaloid · ADC
g26884.t1.2.5b2d4a2aAlkaloid · ADC
g35348.t1Alkaloid · ADC
g35348.t1.1.5b2d4a2fAlkaloid · ADC
g35348.t1.2.5b2d4a2fAlkaloid · ADC
g38050.t1Alkaloid · ADC
g38050.t1.1.5b2d4a30Alkaloid · ADC
g38050.t1.2.5b2d4a30Alkaloid · ADC
g38050.t1.3.5b2d4a30Alkaloid · ADC
g4255.t1Alkaloid · ADC
g46815.t1Alkaloid · ADC
g6203.t1Alkaloid · ADC
g14364.t1Alkaloid · CNMT
g14364.t1.1.5b2d4a34Alkaloid · CNMT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.