Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g17255.t1.1.5b2d4a24Phenylpropanoid · POD
g19145.t1Phenylpropanoid · POD
g19162.2.t1Phenylpropanoid · POD
g20445.t1Phenylpropanoid · POD
g20445.t1.1.5b2d4a26Phenylpropanoid · POD
g20445.t1.2.5b2d4a26Phenylpropanoid · POD
g24682.t1Phenylpropanoid · POD
g24682.t1.1.5b2d4a29Phenylpropanoid · POD
g24682.t1.2.5b2d4a29Phenylpropanoid · POD
g24682.t1.2.5b2d4a29.1.5b2d6ae9Phenylpropanoid · POD
g24682.t1.2.5b2d4a29.2.5b2d6ae9Phenylpropanoid · POD
g24682.t1.3.5b2d4a29Phenylpropanoid · POD
g24682.t1.4.5b2d4a29Phenylpropanoid · POD
g26118.t1Phenylpropanoid · POD
g2945.t1Phenylpropanoid · POD
g2945.t1.1.5b2d4a23Phenylpropanoid · POD
g2945.t1.2.5b2d4a23Phenylpropanoid · POD
g30100.t1Phenylpropanoid · POD
g3370.t1Phenylpropanoid · POD
g34303.t1Phenylpropanoid · POD
g34304.t1Phenylpropanoid · POD
g35256.t1Phenylpropanoid · POD
g36253.t1Phenylpropanoid · POD
g36253.t1.2.5b2d4a2fPhenylpropanoid · POD
g36253.t1.3.5b2d4a2fPhenylpropanoid · POD
g36478.2.t1Phenylpropanoid · POD
g37854.t1Phenylpropanoid · POD
g39456.t1Phenylpropanoid · POD
g43033.t1Phenylpropanoid · POD
g441.t1Phenylpropanoid · POD
g4457.t1Phenylpropanoid · POD
g4943.t1Phenylpropanoid · POD
g4943.t1.1.5b2d4a28Phenylpropanoid · POD
g4943.t1.3.5b2d4a28Phenylpropanoid · POD
g6823.t1Phenylpropanoid · POD
g7766.t1Phenylpropanoid · POD
g7766.t1.1.5b2d4a2dPhenylpropanoid · POD
g7766.t1.2.5b2d4a2dPhenylpropanoid · POD
g7766.t1.3.5b2d4a2dPhenylpropanoid · POD
g7766.t1.4.5b2d4a2dPhenylpropanoid · POD
g7766.t1.5.5b2d4a2dPhenylpropanoid · POD
nepeta_cataria_g11154.t1Rosmarinic acid · PAL
nepeta_cataria_g14845.t1Rosmarinic acid · PAL
nepeta_cataria_g32192.t1Rosmarinic acid · PAL
nepeta_cataria_g36748.t1Rosmarinic acid · PAL
nepeta_cataria_g37641.t1Rosmarinic acid · PAL
nepeta_cataria_g49458.t1Rosmarinic acid · PAL
g17377.t1Steroid / sterol · BR6OX1_CYP85A1
g26957.t1Steroid / sterol · BR6OX1_CYP85A1
g30024.t1Steroid / sterol · BR6OX1_CYP85A1

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.