Species pathway expression context

Nepeta cataria

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
nepeta_cataria.gene_tpm_log1p.tsv
Samples
7
Matrix genes
54,395
Expressed genes
45,452
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateclosed_flower_buds-1immature_leaf-1mature_leaf-1open_flowers-1petiole-1root-1stem-1
g12419.t1.1.5b2d4a32Steroid / sterol · SMT1_SMT2_SMT3
g16503.t1Steroid / sterol · SMT1_SMT2_SMT3
g16503.t1.1.5b2d4a23Steroid / sterol · SMT1_SMT2_SMT3
g16503.t1.2.5b2d4a23Steroid / sterol · SMT1_SMT2_SMT3
g17931.2.t1Steroid / sterol · SMT1_SMT2_SMT3
g17962.t1Steroid / sterol · SMT1_SMT2_SMT3
g17962.t1.1.5b2d4a24Steroid / sterol · SMT1_SMT2_SMT3
g17962.t1.2.5b2d4a24Steroid / sterol · SMT1_SMT2_SMT3
g18461.t1.1.5b2d4a24Steroid / sterol · SMT1_SMT2_SMT3
g18461.t1.3.5b2d4a24Steroid / sterol · SMT1_SMT2_SMT3
g19763.t1Steroid / sterol · SMT1_SMT2_SMT3
g21152.t1Steroid / sterol · SMT1_SMT2_SMT3
g21383.t1Steroid / sterol · SMT1_SMT2_SMT3
g26185.t1Steroid / sterol · SMT1_SMT2_SMT3
g26668.t1Steroid / sterol · SMT1_SMT2_SMT3
g26668.t1.1.5b2d4a2aSteroid / sterol · SMT1_SMT2_SMT3
g26668.t1.2.5b2d4a2aSteroid / sterol · SMT1_SMT2_SMT3
g26668.t1.2.5b2d4a2a.1.5b2d6aeaSteroid / sterol · SMT1_SMT2_SMT3
g26668.t1.2.5b2d4a2a.3.5b2d6aeaSteroid / sterol · SMT1_SMT2_SMT3
g26668.t1.2.5b2d4a2a.4.5b2d6aeaSteroid / sterol · SMT1_SMT2_SMT3
g26668.t1.3.5b2d4a2aSteroid / sterol · SMT1_SMT2_SMT3
g26668.t1.4.5b2d4a2aSteroid / sterol · SMT1_SMT2_SMT3
g26668.t1.5.5b2d4a2aSteroid / sterol · SMT1_SMT2_SMT3
g26668.t1.5.5b2d4a2a.2.5b2d6aeaSteroid / sterol · SMT1_SMT2_SMT3
g27657.t1_g27658.t1Steroid / sterol · SMT1_SMT2_SMT3
g27657.t1_g27658.t1.2.5b2d6aebSteroid / sterol · SMT1_SMT2_SMT3
g27884.t1Steroid / sterol · SMT1_SMT2_SMT3
g28080.t1Steroid / sterol · SMT1_SMT2_SMT3
g28080.t1.1.5b2d4a2aSteroid / sterol · SMT1_SMT2_SMT3
g28620.t1Steroid / sterol · SMT1_SMT2_SMT3
g28620.t1.1.5b2d4a2bSteroid / sterol · SMT1_SMT2_SMT3
g28620.t1.2.5b2d4a2bSteroid / sterol · SMT1_SMT2_SMT3
g28620.t1.3.5b2d4a2bSteroid / sterol · SMT1_SMT2_SMT3
g2974.t1Steroid / sterol · SMT1_SMT2_SMT3
g30673.t1Steroid / sterol · SMT1_SMT2_SMT3
g30673.t1.1.5b2d4a2cSteroid / sterol · SMT1_SMT2_SMT3
g3278.t1Steroid / sterol · SMT1_SMT2_SMT3
g3278.t1.1.5b2d4a24Steroid / sterol · SMT1_SMT2_SMT3
g33652.t1Steroid / sterol · SMT1_SMT2_SMT3
g36858.t1Steroid / sterol · SMT1_SMT2_SMT3
g36858.t1.1.5b2d4a30Steroid / sterol · SMT1_SMT2_SMT3
g36858.t1.2.5b2d4a30Steroid / sterol · SMT1_SMT2_SMT3
g36858.t1.2.5b2d4a30.1.5b2d6af1Steroid / sterol · SMT1_SMT2_SMT3
g37188.t1Steroid / sterol · SMT1_SMT2_SMT3
g45523.t1Steroid / sterol · SMT1_SMT2_SMT3
g48799.t1Steroid / sterol · SMT1_SMT2_SMT3
g7735.t1Steroid / sterol · SMT1_SMT2_SMT3
g7990.t1Steroid / sterol · SMT1_SMT2_SMT3
g7990.t1.1.5b2d4a2dSteroid / sterol · SMT1_SMT2_SMT3
g10610.t1Steroid / sterol · SQE

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.