Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
385488.g9.t1Alkaloid · T16H
457.g75.t1Alkaloid · T16H
511.g167.t1Alkaloid · T16H
746.g13.t1Alkaloid · T16H
1040.g7.t1Alkaloid · TDC
1040.g7.t1.1.5db15143Alkaloid · TDC
1040.g7.t1.2.5db15143Alkaloid · TDC
1748.g22.t1Alkaloid · TDC
367663.g2.t1Alkaloid · TDC
382680.g53.t1Alkaloid · TDC
383685.g75.t1Alkaloid · TDC
383957.g141.t1Alkaloid · TDC
550.g104.t1Alkaloid · TDC
1023.g264.t1Alkaloid · TRI_TRII
1132.g26.t1Alkaloid · TRI_TRII
1177.g84.t1Alkaloid · TRI_TRII
1433.g2.t1Alkaloid · TRI_TRII
1560.g30.t1Alkaloid · TRI_TRII
1574.g13.t1Alkaloid · TRI_TRII
1574.g78.t1Alkaloid · TRI_TRII
1725.g12.t1Alkaloid · TRI_TRII
1764.g1.t1Alkaloid · TRI_TRII
1844.g12.t1Alkaloid · TRI_TRII
1846.g9.t1Alkaloid · TRI_TRII
1923.g3.t1Alkaloid · TRI_TRII
1972.g170.t1Alkaloid · TRI_TRII
303678.g2.t1Alkaloid · TRI_TRII
343803.g2.t1.1.5db15224Alkaloid · TRI_TRII
355524.g1.t1Alkaloid · TRI_TRII
360148.g1.t1Alkaloid · TRI_TRII
382430.g4.t1Alkaloid · TRI_TRII
382708.g17.t1Alkaloid · TRI_TRII
383579.g10.t1Alkaloid · TRI_TRII
383969.g1.t1Alkaloid · TRI_TRII
384089.g2.t1Alkaloid · TRI_TRII
384209.g33.t1Alkaloid · TRI_TRII
384209.g39.t1Alkaloid · TRI_TRII
384807.g1.t1Alkaloid · TRI_TRII
384807.g1.t1.1.5db1539cAlkaloid · TRI_TRII
385239.g26.t1Alkaloid · TRI_TRII
385244.g65.t1Alkaloid · TRI_TRII
385334.g7.t1Alkaloid · TRI_TRII
385334.g7.t1.1.5db153d0Alkaloid · TRI_TRII
385334.g7.t1.2.5db153d0Alkaloid · TRI_TRII
385546.g64.t1Alkaloid · TRI_TRII
385553.g18.t1Alkaloid · TRI_TRII
385591.g9.t1Alkaloid · TRI_TRII
386072.g64.t1Alkaloid · TRI_TRII
447.g34.t1Alkaloid · TRI_TRII
455.g128.t1Alkaloid · TRI_TRII

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.