Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

Reset
Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
337233.g3.t1Alkaloid · 6OMT_4OMT_SOMT
374100.g1.t1Alkaloid · 6OMT_4OMT_SOMT
378681.g2.t1Alkaloid · 6OMT_4OMT_SOMT
703.g6.t1Alkaloid · 6OMT_4OMT_SOMT
1079.g4.t1Alkaloid · 7DLGT
1154.g11.t1Alkaloid · 7DLGT
1568.g137.t1Alkaloid · 7DLGT
1568.g137.t1.1.5db1518bAlkaloid · 7DLGT
1807.g11.t1Alkaloid · 7DLGT
303128.g1.t1Alkaloid · 7DLGT
303128.g2.t1Alkaloid · 7DLGT
351016.g1.t1Alkaloid · 7DLGT
351016.g2.t1Alkaloid · 7DLGT
365934.g1.t1Alkaloid · 7DLGT
371177.g2.t1Alkaloid · 7DLGT
381140.g28.t1Alkaloid · 7DLGT
381140.g31.t1Alkaloid · 7DLGT
381140.g33.t1Alkaloid · 7DLGT
381140.g35.t1Alkaloid · 7DLGT
381140.g37.t1Alkaloid · 7DLGT
381186.g28.t1Alkaloid · 7DLGT
382093.g20.t1Alkaloid · 7DLGT
382734.g25.t1Alkaloid · 7DLGT
382790.g31.t1Alkaloid · 7DLGT
383373.g36.t1Alkaloid · 7DLGT
383373.g37.t1Alkaloid · 7DLGT
383525.g63.t1Alkaloid · 7DLGT
383552.g27.t1Alkaloid · 7DLGT
383552.g28.t1Alkaloid · 7DLGT
383552.g29.t1Alkaloid · 7DLGT
383552.g31.t1Alkaloid · 7DLGT
383552.g32.t1Alkaloid · 7DLGT
383696.g74.t1Alkaloid · 7DLGT
384095.g28.t1Alkaloid · 7DLGT
384284.g1.t1Alkaloid · 7DLGT
385546.g40.t1Alkaloid · 7DLGT
385546.g41.t1Alkaloid · 7DLGT
385546.g42.t1Alkaloid · 7DLGT
385546.g43.t1Alkaloid · 7DLGT
385603.g45.t1Alkaloid · 7DLGT
385835.g32.t1Alkaloid · 7DLGT
385960.g45.t1Alkaloid · 7DLGT
385960.g46.t1Alkaloid · 7DLGT
386087.g1.t1Alkaloid · 7DLGT
449763.g1.t1Alkaloid · 7DLGT
449764.g1.t1Alkaloid · 7DLGT
501.g156.t1Alkaloid · 7DLGT
508.g146.t1Alkaloid · 7DLGT
508.g149.t1Alkaloid · 7DLGT
508.g150.t1Alkaloid · 7DLGT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.