Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
1359.g39.t1Phenylpropanoid · LAC
1445.g18.t1Phenylpropanoid · LAC
1737.g8.t1Phenylpropanoid · LAC
1859.g8.t1Phenylpropanoid · LAC
1962.g10.t1Phenylpropanoid · LAC
1984.g32.t1Phenylpropanoid · LAC
1984.g34.t1Phenylpropanoid · LAC
1984.g34.t1.1.5db15205Phenylpropanoid · LAC
1986.g15.t1Phenylpropanoid · LAC
228781.g2.t1Phenylpropanoid · LAC
308.g237.t1Phenylpropanoid · LAC
376576.g5.t1Phenylpropanoid · LAC
376710.g9.t1Phenylpropanoid · LAC
376710.g9.t1.1.5db1526bPhenylpropanoid · LAC
376710.g9.t1.2.5db1526bPhenylpropanoid · LAC
378354.g7.t1Phenylpropanoid · LAC
381167.g16.t1Phenylpropanoid · LAC
381196.g35.t1Phenylpropanoid · LAC
381196.g36.t1Phenylpropanoid · LAC
382758.g57.t1Phenylpropanoid · LAC
382963.g15.t1Phenylpropanoid · LAC
383458.g31.t1Phenylpropanoid · LAC
383639.g6.t1Phenylpropanoid · LAC
383639.g7.t1Phenylpropanoid · LAC
383652.g1.t1Phenylpropanoid · LAC
383652.g1.t1.1.5db15345Phenylpropanoid · LAC
383786.g9.t1Phenylpropanoid · LAC
383808.g38.t1Phenylpropanoid · LAC
383808.g7.t1Phenylpropanoid · LAC
384088.g15.t1Phenylpropanoid · LAC
384202.g36.t1Phenylpropanoid · LAC
384421.g45.t1_384421.g46.t1Phenylpropanoid · LAC
385027.g34.t1Phenylpropanoid · LAC
385387.g17.t1Phenylpropanoid · LAC
385610.g74.t1_385610.g75.t1Phenylpropanoid · LAC
386068.g89.t1Phenylpropanoid · LAC
455.g117.t1Phenylpropanoid · LAC
491811.g1.t1Phenylpropanoid · LAC
501078.g1.t1Phenylpropanoid · LAC
506.g114.t1Phenylpropanoid · LAC
506.g138.t1Phenylpropanoid · LAC
546.g73.t1Phenylpropanoid · LAC
724.g31.t1Phenylpropanoid · LAC
726.g101.t1Phenylpropanoid · LAC
737.g20.t1Phenylpropanoid · LAC
741.g44.t1Phenylpropanoid · LAC
748.g62.t1Phenylpropanoid · LAC
821.g5.t1Phenylpropanoid · LAC
973.g64.t1Phenylpropanoid · LAC
973.g64.t1.1.5db15556Phenylpropanoid · LAC

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.