Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
1986.g43.t1Steroid / sterol · FK
382054.g1.t1Steroid / sterol · FK
382527.g21.t1Steroid / sterol · FK
382758.g30.t1Steroid / sterol · FK
382758.g30.t1.1.5db152f9Steroid / sterol · FK
382758.g30.t1.2.5db152f9Steroid / sterol · FK
382758.g30.t1.3.5db152f9Steroid / sterol · FK
382758.g30.t1.4.5db152faSteroid / sterol · FK
382772.g31.t1Steroid / sterol · FK
382992.g34.t1Steroid / sterol · FK
383923.g22.t1Steroid / sterol · FK
383923.g22.t1.1.5db15358Steroid / sterol · FK
384188.g1.t1Steroid / sterol · FK
385105.g19.t1Steroid / sterol · FK
385505.g1.t1Steroid / sterol · FK
386050.g90.t1Steroid / sterol · FK
461947.g1.t1Steroid / sterol · FK
519.g131.t1Steroid / sterol · FK
695.g80.t1Steroid / sterol · FK
752.g109.t1Steroid / sterol · FK
1276.g8.t1Steroid / sterol · HYD1
1908.g55.t1Steroid / sterol · HYD1
380110.g5.t1Steroid / sterol · HYD1
686.g25.t1Steroid / sterol · HYD1
726.g27.t1Steroid / sterol · HYD1
1970.g18.t1Steroid / sterol · ROT3_CYP90C1
1191.g3.t1_1191.g4.t1Steroid / sterol · SMO1_SMO2
1601.g56.t1Steroid / sterol · SMO1_SMO2
1692.g2.t1Steroid / sterol · SMO1_SMO2
1731.g25.t1Steroid / sterol · SMO1_SMO2
1821.g73.t1Steroid / sterol · SMO1_SMO2
1897.g31.t1Steroid / sterol · SMO1_SMO2
1897.g31.t1.1.5db151ceSteroid / sterol · SMO1_SMO2
1924.g90.t1Steroid / sterol · SMO1_SMO2
1967.g2.t1Steroid / sterol · SMO1_SMO2
1967.g2.t1.1.5db151f3Steroid / sterol · SMO1_SMO2
1967.g2.t1.2.5db151f3Steroid / sterol · SMO1_SMO2
357218.g2.t1Steroid / sterol · SMO1_SMO2
376920.g2.t1Steroid / sterol · SMO1_SMO2
376920.g2.t1.1.5db1526bSteroid / sterol · SMO1_SMO2
380424.g2.t1Steroid / sterol · SMO1_SMO2
380661.g4.t1Steroid / sterol · SMO1_SMO2
381360.g1.t1Steroid / sterol · SMO1_SMO2
382691.g24.t1Steroid / sterol · SMO1_SMO2
382917.g37.t1Steroid / sterol · SMO1_SMO2
383696.g71.t1Steroid / sterol · SMO1_SMO2
383935.g1.t1Steroid / sterol · SMO1_SMO2
384599.g3.t1Steroid / sterol · SMO1_SMO2
384599.g3.t1.1.5db15391Steroid / sterol · SMO1_SMO2
384609.g2.t1_384609.g3.t1Steroid / sterol · SMO1_SMO2

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.