Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
381186.g28.t1Terpenoid · UGT
381186.g30.t1Terpenoid · UGT
381929.g4.t1Terpenoid · UGT
382215.g1.t1Terpenoid · UGT
382215.g19.t1Terpenoid · UGT
382790.g31.t1Terpenoid · UGT
384095.g28.t1Terpenoid · UGT
384095.g29.t1_384095.g30.t1Terpenoid · UGT
384284.g1.t1Terpenoid · UGT
385203.g13.t1Terpenoid · UGT
385214.g116.t1Terpenoid · UGT
385505.g36.t1Terpenoid · UGT
385546.g40.t1Terpenoid · UGT
385546.g43.t1Terpenoid · UGT
385546.g51.t1Terpenoid · UGT
385803.g3.t1Terpenoid · UGT
447.g109.t1Terpenoid · UGT
504.g90.t1Terpenoid · UGT
512.g84.t1Terpenoid · UGT
539.g144.t1Terpenoid · UGT
558.g200.t1Terpenoid · UGT
558.g202.t1Terpenoid · UGT
665.g28.t1Terpenoid · UGT
674.g49.t1Terpenoid · UGT
674.g5.t1Terpenoid · UGT
685.g18.t1Terpenoid · UGT
714.g37.t1Terpenoid · UGT
732.g86.t1Terpenoid · UGT
732.g88.t1Terpenoid · UGT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.