Perilla frutescens var. hirtella mitochondrial
Biopython GenomeDiagram 1.79; GenBank local location segments.
cox2 · PQ048223.1 · 2,228–2,933 bp · −
cox2 · PQ048223.1 · 75,844–75,911 bp · −
cox2 · PQ048223.1 · 225,511–225,578 bp · −
cox2 · PQ048223.1 · 299,286–299,353 bp · −
nad1 · PQ048223.1 · 116,963–117,347 bp · −
trnI-CAU · PQ048223.1 · 22,310–22,386 bp · −
rrn5 · PQ048223.1 · 25,874–25,989 bp · −
rrn18 · PQ048223.1 · 26,141–28,060 bp · −
atp9 · PQ048223.1 · 33,054–33,278 bp · −
trnS-GCU · PQ048223.1 · 48,287–48,374 bp · −
trnE-UUC · PQ048223.1 · 53,475–53,546 bp · −
rps12 · PQ048223.1 · 69,083–69,460 bp · −
nad3 · PQ048223.1 · 69,509–69,865 bp · −
cob · PQ048223.1 · 72,348–73,523 bp · −
trnS-GGA · PQ048223.1 · 99,554–99,640 bp · −
trnD-GUC · PQ048223.1 · 100,238–100,311 bp · −
ccmC · PQ048223.1 · 118,344–119,039 bp · −
rps14 · PQ048223.1 · 120,683–120,967 bp · −
rpl5 · PQ048223.1 · 120,969–121,523 bp · −
trnW-CCA · PQ048223.1 · 139,237–139,310 bp · −
trnP-UGG · PQ048223.1 · 139,458–139,531 bp · −
nad9 · PQ048223.1 · 139,945–140,517 bp · −
trnK-UUU · PQ048223.1 · 142,485–142,557 bp · −
rpl16 · PQ048223.1 · 194,756–195,232 bp · −
rps3 · PQ048223.1 · 195,159–198,380 bp · −
rps4 · PQ048223.1 · 198,885–199,853 bp · −
trnQ-UUG · PQ048223.1 · 203,295–203,366 bp · −
trnG-GCC · PQ048223.1 · 206,033–206,104 bp · −
nad5 · PQ048223.1 · 244,617–246,911 bp · −
nad7 · PQ048223.1 · 215,513–220,239 bp · −
cox3 · PQ048223.1 · 222,302–223,099 bp · −
atp8 · PQ048223.1 · 223,679–224,158 bp · −
trnP-UGG · PQ048223.1 · 227,481–227,555 bp · −
trnF-GAA · PQ048223.1 · 227,806–227,879 bp · −
orf101 · PQ048223.1 · 244,042–244,278 bp · −
atp1 · PQ048223.1 · 261,948–263,468 bp · −
cox3 · PQ048223.1 · 296,077–296,874 bp · −
atp8 · PQ048223.1 · 297,454–297,933 bp · −
trnS-UGA · PQ048223.1 · 5,743–5,829 bp · +
rps13 · PQ048223.1 · 9,817–10,167 bp · +
nad1 · PQ048223.1 · 11,121–12,710 bp · +
nad1 · PQ048223.1 · 153,750–154,005 bp · +
trnH-GUG · PQ048223.1 · 19,721–19,794 bp · +
ccmFN · PQ048223.1 · 56,397–58,136 bp · +
cox1 · PQ048223.1 · 80,846–83,390 bp · +
nad4 · PQ048223.1 · 103,080–110,911 bp · +
orf182a · PQ048223.1 · 138,263–138,811 bp · +
ccmB · PQ048223.1 · 144,778–145,398 bp · +
ccmFC · PQ048223.1 · 149,108–151,339 bp · +
trnC-GCA · PQ048223.1 · 161,965–162,035 bp · +
trnN-GUU · PQ048223.1 · 164,138–164,209 bp · +
trnY-GUA · PQ048223.1 · 164,932–165,014 bp · +
nad2 · PQ048223.1 · 279,217–280,978 bp · +
nad2 · PQ048223.1 · 165,535–169,349 bp · +
orf121 · PQ048223.1 · 165,845–166,210 bp · +
rrn26 · PQ048223.1 · 173,111–176,526 bp · +
trnfM-CAU · PQ048223.1 · 176,759–176,832 bp · +
trnM-CAU · PQ048223.1 · 182,366–182,438 bp · +
nad4L · PQ048223.1 · 191,732–192,004 bp · +
atp4 · PQ048223.1 · 192,178–192,774 bp · +
nad5 · PQ048223.1 · 210,631–212,230 bp · +
mttB · PQ048223.1 · 230,267–231,064 bp · +
orf117a · PQ048223.1 · 231,906–232,259 bp · +
matR · PQ048223.1 · 232,416–234,371 bp · +
rps10 · PQ048223.1 · 238,763–240,315 bp · +
nad6 · PQ048223.1 · 241,628–242,245 bp · +
orf3 · PQ048223.1 · 246,405–246,716 bp · +
trnfM-CAU · PQ048223.1 · 278,306–278,379 bp · +
atp6 · PQ048223.1 · 294,642–295,538 bp · +
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275 kb
Perilla frutescens var. hirtella
ANNOTATED MITOGENOME
PQ048223.1
301,230 bp · 64 genes
Gene function
Cytochrome
Transfer RNA
Ribosomal protein
NADH dehydrogenase
Ribosomal RNA
ATP synthase
Other
0 75308 150615 225922 301230 bp
Forward strand 5′ → 3′
trnS-UGA rps13 nad1 trnH-GUG ccmFN cox1 nad4 orf182a ccmB ccmFC nad1 trnC-GCA trnN-GUU trnY-GUA nad2 orf121 rrn26 trnfM-CAU trnM-CAU nad4L atp4 nad5 mttB orf117a matR rps10 nad6 orf3 trnfM-CAU nad2 atp6
cox2 trnI-CAU rrn5 rrn18 atp9 trnS-GCU trnE-UUC rps12 nad3 cob cox2 trnS-GGA trnD-GUC nad1 ccmC rps14 rpl5 trnW-CCA trnP-UGG nad9 trnK-UUU rpl16 rps3 rps4 trnQ-UUG trnG-GCC nad7 cox3 atp8 cox2 trnP-UGG trnF-GAA orf101 nad5 atp1 cox3 atp8 cox2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. A circular layout does not establish a physical master-circle configuration. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
69 local segments
Gene Type Group Strand Start End Length
cox2 gene − 2228 2933 706 Locate
trnS-UGA gene + 5743 5829 87 Locate
rps13 gene + 9817 10167 351 Locate
nad1 gene + 11121 12710 1590 Locate
trnH-GUG gene + 19721 19794 74 Locate
trnI-CAU gene − 22310 22386 77 Locate
rrn5 gene − 25874 25989 116 Locate
rrn18 gene − 26141 28060 1920 Locate
atp9 gene − 33054 33278 225 Locate
trnS-GCU gene − 48287 48374 88 Locate
trnE-UUC gene − 53475 53546 72 Locate
ccmFN gene + 56397 58136 1740 Locate
rps12 gene − 69083 69460 378 Locate
nad3 gene − 69509 69865 357 Locate
cob gene − 72348 73523 1176 Locate
cox2 gene − 75844 75911 68 Locate
cox1 gene + 80846 83390 2545 Locate
trnS-GGA gene − 99554 99640 87 Locate
trnD-GUC gene − 100238 100311 74 Locate
nad4 gene + 103080 110911 7832 Locate
nad1 gene − 116963 117347 385 Locate
ccmC gene − 118344 119039 696 Locate
rps14 gene − 120683 120967 285 Locate
rpl5 gene − 120969 121523 555 Locate
orf182a gene + 138263 138811 549 Locate
trnW-CCA gene − 139237 139310 74 Locate
trnP-UGG gene − 139458 139531 74 Locate
nad9 gene − 139945 140517 573 Locate
trnK-UUU gene − 142485 142557 73 Locate
ccmB gene + 144778 145398 621 Locate
ccmFC gene + 149108 151339 2232 Locate
nad1 gene + 153750 154005 256 Locate
trnC-GCA gene + 161965 162035 71 Locate
trnN-GUU gene + 164138 164209 72 Locate
trnY-GUA gene + 164932 165014 83 Locate
nad2 gene + 165535 169349 3815 Locate
orf121 gene + 165845 166210 366 Locate
rrn26 gene + 173111 176526 3416 Locate
trnfM-CAU gene + 176759 176832 74 Locate
trnM-CAU gene + 182366 182438 73 Locate
nad4L gene + 191732 192004 273 Locate
atp4 gene + 192178 192774 597 Locate
rpl16 gene − 194756 195232 477 Locate
rps3 gene − 195159 198380 3222 Locate
rps4 gene − 198885 199853 969 Locate
trnQ-UUG gene − 203295 203366 72 Locate
trnG-GCC gene − 206033 206104 72 Locate
nad5 gene + 210631 212230 1600 Locate
nad7 gene − 215513 220239 4727 Locate
cox3 gene − 222302 223099 798 Locate
atp8 gene − 223679 224158 480 Locate
cox2 gene − 225511 225578 68 Locate
trnP-UGG gene − 227481 227555 75 Locate
trnF-GAA gene − 227806 227879 74 Locate
mttB gene + 230267 231064 798 Locate
orf117a gene + 231906 232259 354 Locate
matR gene + 232416 234371 1956 Locate
rps10 gene + 238763 240315 1553 Locate
nad6 gene + 241628 242245 618 Locate
orf101 gene − 244042 244278 237 Locate
nad5 gene − 244617 246911 2295 Locate
orf3 gene + 246405 246716 312 Locate
atp1 gene − 261948 263468 1521 Locate
trnfM-CAU gene + 278306 278379 74 Locate
nad2 gene + 279217 280978 1762 Locate
atp6 gene + 294642 295538 897 Locate
cox3 gene − 296077 296874 798 Locate
atp8 gene − 297454 297933 480 Locate
cox2 gene − 299286 299353 68 Locate
Status Available
Accession PQ048223.1
Length 301,230 bp
GC content 45.2%
Annotated genes 64
Gene sequence records 9
Cytochrome 12 Translation Rna 20 Ribosomal Protein 8 Nad Dehydrogenase 13 Ribosomal Rna 3 Atp Synthase 6 Other 7
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources