Perilla frutescens chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
petD · OR567250.1 · 6,264–7,463 bp · −
petB · OR567250.1 · 7,652–9,016 bp · −
psbH · OR567250.1 · 9,143–9,382 bp · −
psbT · OR567250.1 · 9,664–9,765 bp · −
psbB · OR567250.1 · 9,938–11,464 bp · −
rps12 · OR567250.1 · 97,575–97,817 bp · −
rps18 · OR567250.1 · 15,505–15,810 bp · −
rpl33 · OR567250.1 · 15,995–16,195 bp · −
psaJ · OR567250.1 · 16,645–16,779 bp · −
petG · OR567250.1 · 17,513–17,626 bp · −
petL · OR567250.1 · 17,802–17,897 bp · −
petA · OR567250.1 · 20,580–21,542 bp · −
cemA · OR567250.1 · 21,770–22,459 bp · −
ycf4 · OR567250.1 · 23,119–23,673 bp · −
psaI · OR567250.1 · 24,119–24,229 bp · −
accD · OR567250.1 · 24,957–26,438 bp · −
rbcL · OR567250.1 · 27,129–28,589 bp · −
trnM-CAU · OR567250.1 · 31,501–31,573 bp · −
trnF-GAA · OR567250.1 · 35,756–35,828 bp · −
trnL-UAA · OR567250.1 · 36,129–36,705 bp · −
trnS-GGA · OR567250.1 · 38,752–38,838 bp · −
trnG-GCC · OR567250.1 · 47,592–47,662 bp · −
psbZ · OR567250.1 · 47,939–48,127 bp · −
psbC · OR567250.1 · 48,804–50,225 bp · −
psbD · OR567250.1 · 50,173–51,234 bp · −
trnT-GGU · OR567250.1 · 52,544–52,615 bp · −
petN · OR567250.1 · 55,242–55,337 bp · −
trnC-GCA · OR567250.1 · 55,499–55,569 bp · −
trnR-UCU · OR567250.1 · 73,589–73,660 bp · −
trnT-CGU · OR567250.1 · 73,853–74,601 bp · −
psbI · OR567250.1 · 75,602–75,730 bp · −
psbK · OR567250.1 · 76,045–76,230 bp · −
rpl2 · OR567250.1 · 83,827–85,315 bp · −
rpl23 · OR567250.1 · 85,334–85,615 bp · −
trnM-CAU · OR567250.1 · 85,781–85,854 bp · −
trnL-CAA · OR567250.1 · 93,384–93,464 bp · −
ndhB · OR567250.1 · 94,040–96,238 bp · −
rps7 · OR567250.1 · 96,503–96,970 bp · −
trnN-GUU · OR567250.1 · 107,918–107,989 bp · −
ndhF · OR567250.1 · 109,343–111,574 bp · −
ndhD · OR567250.1 · 114,218–115,747 bp · −
psaC · OR567250.1 · 115,847–116,092 bp · −
ndhE · OR567250.1 · 116,342–116,647 bp · −
ndhG · OR567250.1 · 116,870–117,400 bp · −
ndhI · OR567250.1 · 117,769–118,260 bp · −
ndhA · OR567250.1 · 118,341–120,474 bp · −
ndhH · OR567250.1 · 120,476–121,657 bp · −
rps15 · OR567250.1 · 121,757–122,029 bp · −
ycf1 · OR567250.1 · 122,430–127,979 bp · −
trnR-ACG · OR567250.1 · 128,941–129,014 bp · −
rrn5S · OR567250.1 · 129,248–129,378 bp · −
rrn4.5S · OR567250.1 · 129,501–129,740 bp · −
rrn23S · OR567250.1 · 129,841–132,657 bp · −
trnA-UGC · OR567250.1 · 132,828–133,718 bp · −
trnI · OR567250.1 · 133,783–134,803 bp · −
rrn16S · OR567250.1 · 135,102–136,592 bp · −
trnV-GAC · OR567250.1 · 136,819–136,890 bp · −
ycf15 · OR567250.1 · 143,177–143,374 bp · −
ycf2 · OR567250.1 · 143,516–150,355 bp · −
rpl22 · OR567250.1 · 289–756 bp · +
rps3 · OR567250.1 · 741–1,403 bp · +
rpl16 · OR567250.1 · 1,546–2,821 bp · +
rpl14 · OR567250.1 · 2,953–3,321 bp · +
rps8 · OR567250.1 · 3,497–3,901 bp · +
infA · OR567250.1 · 4,033–4,266 bp · +
rpl36 · OR567250.1 · 4,370–4,483 bp · +
rps11 · OR567250.1 · 4,593–5,009 bp · +
rpoA · OR567250.1 · 5,080–6,087 bp · +
psbN · OR567250.1 · 9,470–9,601 bp · +
clpP · OR567250.1 · 11,922–13,839 bp · +
rps12 · OR567250.1 · 13,957–14,070 bp · +
rps12 · OR567250.1 · 138,481–138,723 bp · +
rpl20 · OR567250.1 · 14,889–15,275 bp · +
trnP-UGG · OR567250.1 · 17,066–17,139 bp · +
trnW-CCA · OR567250.1 · 17,313–17,386 bp · +
psbE · OR567250.1 · 18,754–19,005 bp · +
psbF · OR567250.1 · 19,020–19,139 bp · +
psbL · OR567250.1 · 19,163–19,279 bp · +
psbJ · OR567250.1 · 19,414–19,536 bp · +
atpB · OR567250.1 · 29,392–30,888 bp · +
atpE · OR567250.1 · 30,885–31,286 bp · +
ndhC · OR567250.1 · 33,391–33,753 bp · +
ndhK · OR567250.1 · 33,805–34,482 bp · +
ndhJ · OR567250.1 · 34,593–35,069 bp · +
trnT-UGU · OR567250.1 · 37,400–37,472 bp · +
rps4 · OR567250.1 · 37,926–38,531 bp · +
ycf3 · OR567250.1 · 39,685–41,644 bp · +
psaA · OR567250.1 · 42,288–44,540 bp · +
psaB · OR567250.1 · 44,566–46,770 bp · +
rps14 · OR567250.1 · 46,892–47,194 bp · +
trnM-CAU · OR567250.1 · 47,344–47,417 bp · +
trnS-UGA · OR567250.1 · 48,475–48,557 bp · +
trnE-UUC · OR567250.1 · 53,171–53,243 bp · +
trnY-GUA · OR567250.1 · 53,311–53,394 bp · +
trnD-GUC · OR567250.1 · 53,505–53,578 bp · +
psbM · OR567250.1 · 54,106–54,210 bp · +
rpoB · OR567250.1 · 56,754–59,966 bp · +
rpoC1 · OR567250.1 · 59,993–62,813 bp · +
rpoC2 · OR567250.1 · 62,978–67,174 bp · +
rps2 · OR567250.1 · 67,387–68,097 bp · +
atpI · OR567250.1 · 68,327–69,070 bp · +
atpH · OR567250.1 · 70,102–70,347 bp · +
atpF · OR567250.1 · 70,620–71,868 bp · +
atpA · OR567250.1 · 71,961–73,484 bp · +
trnS-GCU · OR567250.1 · 75,294–75,381 bp · +
trnQ-UUG · OR567250.1 · 76,628–76,699 bp · +
rps16 · OR567250.1 · 77,737–78,871 bp · +
trnK-UUU · OR567250.1 · 79,412–82,002 bp · +
matK · OR567250.1 · 80,143–81,687 bp · +
psbA · OR567250.1 · 82,228–83,286 bp · +
trnH-GUG · OR567250.1 · 83,629–83,702 bp · +
ycf2 · OR567250.1 · 85,943–92,782 bp · +
ycf15 · OR567250.1 · 92,924–93,121 bp · +
trnV-GAC · OR567250.1 · 99,408–99,479 bp · +
rrn16S · OR567250.1 · 99,706–101,196 bp · +
trnI · OR567250.1 · 101,495–102,515 bp · +
trnA-UGC · OR567250.1 · 102,580–103,470 bp · +
rrn23S · OR567250.1 · 103,641–106,457 bp · +
rrn4.5S · OR567250.1 · 106,558–106,797 bp · +
rrn5S · OR567250.1 · 106,920–107,050 bp · +
trnR-ACG · OR567250.1 · 107,284–107,357 bp · +
rpl32 · OR567250.1 · 111,993–112,163 bp · +
trnL-UAG · OR567250.1 · 112,829–112,908 bp · +
ccsA · OR567250.1 · 113,001–113,972 bp · +
trnN-GUU · OR567250.1 · 128,309–128,380 bp · +
rps7 · OR567250.1 · 139,328–139,795 bp · +
ndhB · OR567250.1 · 140,060–142,258 bp · +
trnL-CAA · OR567250.1 · 142,834–142,914 bp · +
trnM-CAU · OR567250.1 · 150,444–150,517 bp · +
rpl23 · OR567250.1 · 150,683–150,964 bp · +
rpl2 · OR567250.1 · 150,983–152,471 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Perilla frutescens
ANNOTATED PLASTOME
OR567250.1
152,593 bp · 130 genes
Gene function
Ribosomal protein
Other
RNA polymerase
Cytochrome
Photosystem II
Photosystem I
Transfer RNA
ATP synthase
NADH dehydrogenase
Ribosomal RNA
0 38148 76296 114445 152593 bp
Forward strand 5′ → 3′
rpl22 rps3 rpl16 rpl14 rps8 infA rpl36 rps11 rpoA psbN clpP rps12 rpl20 trnP-UGG trnW-CCA psbE psbF psbL psbJ atpB atpE ndhC ndhK ndhJ trnT-UGU rps4 ycf3 psaA psaB rps14 trnM-CAU trnS-UGA trnE-UUC trnY-GUA trnD-GUC psbM rpoB rpoC1 rpoC2 rps2 atpI atpH atpF atpA trnS-GCU trnQ-UUG rps16 trnK-UUU matK psbA trnH-GUG ycf2 ycf15 trnV-GAC rrn16S trnI trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2
petD petB psbH psbT psbB rps18 rpl33 psaJ petG petL petA cemA ycf4 psaI accD rbcL trnM-CAU trnF-GAA trnL-UAA trnS-GGA trnG-GCC psbZ psbC psbD trnT-GGU petN trnC-GCA trnR-UCU trnT-CGU psbI psbK rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
rpl22 gene + 289 756 468 Locate
rps3 gene + 741 1403 663 Locate
rpl16 gene + 1546 2821 1276 Locate
rpl14 gene + 2953 3321 369 Locate
rps8 gene + 3497 3901 405 Locate
infA gene + 4033 4266 234 Locate
rpl36 gene + 4370 4483 114 Locate
rps11 gene + 4593 5009 417 Locate
rpoA gene + 5080 6087 1008 Locate
petD gene − 6264 7463 1200 Locate
petB gene − 7652 9016 1365 Locate
psbH gene − 9143 9382 240 Locate
psbN gene + 9470 9601 132 Locate
psbT gene − 9664 9765 102 Locate
psbB gene − 9938 11464 1527 Locate
clpP gene + 11922 13839 1918 Locate
rps12 gene + 13957 14070 114 Locate
rpl20 gene + 14889 15275 387 Locate
rps18 gene − 15505 15810 306 Locate
rpl33 gene − 15995 16195 201 Locate
psaJ gene − 16645 16779 135 Locate
trnP-UGG gene + 17066 17139 74 Locate
trnW-CCA gene + 17313 17386 74 Locate
petG gene − 17513 17626 114 Locate
petL gene − 17802 17897 96 Locate
psbE gene + 18754 19005 252 Locate
psbF gene + 19020 19139 120 Locate
psbL gene + 19163 19279 117 Locate
psbJ gene + 19414 19536 123 Locate
petA gene − 20580 21542 963 Locate
cemA gene − 21770 22459 690 Locate
ycf4 gene − 23119 23673 555 Locate
psaI gene − 24119 24229 111 Locate
accD gene − 24957 26438 1482 Locate
rbcL gene − 27129 28589 1461 Locate
atpB gene + 29392 30888 1497 Locate
atpE gene + 30885 31286 402 Locate
trnM-CAU gene − 31501 31573 73 Locate
ndhC gene + 33391 33753 363 Locate
ndhK gene + 33805 34482 678 Locate
ndhJ gene + 34593 35069 477 Locate
trnF-GAA gene − 35756 35828 73 Locate
trnL-UAA gene − 36129 36705 577 Locate
trnT-UGU gene + 37400 37472 73 Locate
rps4 gene + 37926 38531 606 Locate
trnS-GGA gene − 38752 38838 87 Locate
ycf3 gene + 39685 41644 1960 Locate
psaA gene + 42288 44540 2253 Locate
psaB gene + 44566 46770 2205 Locate
rps14 gene + 46892 47194 303 Locate
trnM-CAU gene + 47344 47417 74 Locate
trnG-GCC gene − 47592 47662 71 Locate
psbZ gene − 47939 48127 189 Locate
trnS-UGA gene + 48475 48557 83 Locate
psbC gene − 48804 50225 1422 Locate
psbD gene − 50173 51234 1062 Locate
trnT-GGU gene − 52544 52615 72 Locate
trnE-UUC gene + 53171 53243 73 Locate
trnY-GUA gene + 53311 53394 84 Locate
trnD-GUC gene + 53505 53578 74 Locate
psbM gene + 54106 54210 105 Locate
petN gene − 55242 55337 96 Locate
trnC-GCA gene − 55499 55569 71 Locate
rpoB gene + 56754 59966 3213 Locate
rpoC1 gene + 59993 62813 2821 Locate
rpoC2 gene + 62978 67174 4197 Locate
rps2 gene + 67387 68097 711 Locate
atpI gene + 68327 69070 744 Locate
atpH gene + 70102 70347 246 Locate
atpF gene + 70620 71868 1249 Locate
atpA gene + 71961 73484 1524 Locate
trnR-UCU gene − 73589 73660 72 Locate
trnT-CGU gene − 73853 74601 749 Locate
trnS-GCU gene + 75294 75381 88 Locate
psbI gene − 75602 75730 129 Locate
psbK gene − 76045 76230 186 Locate
trnQ-UUG gene + 76628 76699 72 Locate
rps16 gene + 77737 78871 1135 Locate
trnK-UUU gene + 79412 82002 2591 Locate
matK gene + 80143 81687 1545 Locate
psbA gene + 82228 83286 1059 Locate
trnH-GUG gene + 83629 83702 74 Locate
rpl2 gene − 83827 85315 1489 Locate
rpl23 gene − 85334 85615 282 Locate
trnM-CAU gene − 85781 85854 74 Locate
ycf2 gene + 85943 92782 6840 Locate
ycf15 gene + 92924 93121 198 Locate
trnL-CAA gene − 93384 93464 81 Locate
ndhB gene − 94040 96238 2199 Locate
rps7 gene − 96503 96970 468 Locate
rps12 gene − 97575 97817 243 Locate
trnV-GAC gene + 99408 99479 72 Locate
rrn16S gene + 99706 101196 1491 Locate
trnI gene + 101495 102515 1021 Locate
trnA-UGC gene + 102580 103470 891 Locate
rrn23S gene + 103641 106457 2817 Locate
rrn4.5S gene + 106558 106797 240 Locate
rrn5S gene + 106920 107050 131 Locate
trnR-ACG gene + 107284 107357 74 Locate
trnN-GUU gene − 107918 107989 72 Locate
ndhF gene − 109343 111574 2232 Locate
rpl32 gene + 111993 112163 171 Locate
trnL-UAG gene + 112829 112908 80 Locate
ccsA gene + 113001 113972 972 Locate
ndhD gene − 114218 115747 1530 Locate
psaC gene − 115847 116092 246 Locate
ndhE gene − 116342 116647 306 Locate
ndhG gene − 116870 117400 531 Locate
ndhI gene − 117769 118260 492 Locate
ndhA gene − 118341 120474 2134 Locate
ndhH gene − 120476 121657 1182 Locate
rps15 gene − 121757 122029 273 Locate
ycf1 gene − 122430 127979 5550 Locate
trnN-GUU gene + 128309 128380 72 Locate
trnR-ACG gene − 128941 129014 74 Locate
rrn5S gene − 129248 129378 131 Locate
rrn4.5S gene − 129501 129740 240 Locate
rrn23S gene − 129841 132657 2817 Locate
trnA-UGC gene − 132828 133718 891 Locate
trnI gene − 133783 134803 1021 Locate
rrn16S gene − 135102 136592 1491 Locate
trnV-GAC gene − 136819 136890 72 Locate
rps12 gene + 138481 138723 243 Locate
rps7 gene + 139328 139795 468 Locate
ndhB gene + 140060 142258 2199 Locate
trnL-CAA gene + 142834 142914 81 Locate
ycf15 gene − 143177 143374 198 Locate
ycf2 gene − 143516 150355 6840 Locate
trnM-CAU gene + 150444 150517 74 Locate
rpl23 gene + 150683 150964 282 Locate
rpl2 gene + 150983 152471 1489 Locate
Status Available
Accession OR567250.1
Length 152,593 bp
GC content 37.8%
Annotated genes 130
Gene sequence records 8
Ribosomal Protein 25 Other 14 Rna Polymerase 4 Cytochrome 6 Photosystem Ii 15 Photosystem I 5 Translation Rna 36 Atp Synthase 6 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 60
Direct 19
Inverted 7
Palindromic 6
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources