Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil04G0021050.1.v1.484Flavonoid · F3H_CYP75B
Smil05G0001500.1.v1.484Flavonoid · F3H_CYP75B
Smil05G0024890.1.v1.484Flavonoid · F3H_CYP75B
Smil05G0024910.1.v1.484Flavonoid · F3H_CYP75B
Smil05G0027760.1.v1.484Flavonoid · F3H_CYP75B
Smil06G0001620.1.v1.484Flavonoid · F3H_CYP75B
Smil06G0011280.1.v1.484Flavonoid · F3H_CYP75B
Smil06G0014700.1.v1.484Flavonoid · F3H_CYP75B
Smil07G0013640.1.v1.484Flavonoid · F3H_CYP75B
SmilGWHAOSJ000000730000370.1.v1.484Flavonoid · F3H_CYP75B
SmilGWHAOSJ000009070013310.1.v1.484Flavonoid · F3H_CYP75B
Smil00G0041110.1.v1.484Flavonoid · IFR
Smil00G0041120.1.v1.484Flavonoid · IFR
Smil01G0005720.1.v1.484Flavonoid · IFR
Smil01G0005730.1.v1.484Flavonoid · IFR
Smil03G0018230.1.v1.484Flavonoid · IFR
Smil03G0020970.1.v1.484Flavonoid · IFR
Smil03G0020980.1.v1.484Flavonoid · IFR
Smil03G0021000.1.v1.484Flavonoid · IFR
Smil03G0021010.1.v1.484Flavonoid · IFR
Smil03G0021020.1.v1.484Flavonoid · IFR
Smil04G0027300.1.v1.484Flavonoid · IFR
Smil05G0026870.1.v1.484Flavonoid · IFR
Smil07G0016580.1.v1.484Flavonoid · IFR
Smil03G0020400.1.v1.484Flavonoid · IFS
Smil00G0001840.1.v1.484Flavonoid · PAL
Smil00G0005450.1.v1.484Flavonoid · PAL
Smil00G0005460.1.v1.484Flavonoid · PAL
Smil00G0031980.1.v1.484Flavonoid · PAL
Smil00G0033540.1.v1.484Flavonoid · PAL
Smil00G0045640.1.v1.484Flavonoid · PAL
Smil01G0006420.1.v1.484Flavonoid · PAL
Smil01G0013430.1.v1.484Flavonoid · PAL
Smil01G0025020.1.v1.484Flavonoid · PAL
Smil01G0028890.1.v1.484Flavonoid · PAL
Smil01G0029860.1.v1.484Flavonoid · PAL
Smil02G0001350.1.v1.484Flavonoid · PAL
Smil02G0026130.1.v1.484Flavonoid · PAL
Smil02G0030980.1.v1.484Flavonoid · PAL
Smil02G0036700.1.v1.484Flavonoid · PAL
Smil03G0000780.1.v1.484Flavonoid · PAL
Smil03G0004730.1.v1.484Flavonoid · PAL
Smil03G0006030.1.v1.484Flavonoid · PAL
Smil03G0018190.1.v1.484Flavonoid · PAL
Smil03G0029940.1.v1.484Flavonoid · PAL
Smil03G0035570.1.v1.484Flavonoid · PAL
Smil04G0000960.1.v1.484Flavonoid · PAL
Smil04G0001480.1.v1.484Flavonoid · PAL
Smil04G0001740.1.v1.484Flavonoid · PAL
Smil04G0007890.1.v1.484Flavonoid · PAL

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.