Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil05G0019560.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil05G0019570.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil05G0029290.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil05G0033040.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil05G0033050.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil06G0004130.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil06G0006580.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil06G0007990.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil06G0015440.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil06G0017030.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil06G0018360.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil06G0021700.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil06G0031370.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil07G0002430.1.v1.484Phenylpropanoid · C4H_CYP73A
SmilGWHAOSJ000000990000190.1.v1.484Phenylpropanoid · C4H_CYP73A
SmilGWHAOSJ000006320008240.1.v1.484Phenylpropanoid · C4H_CYP73A
Smil00G0006080.1.v1.484Phenylpropanoid · CAD
Smil00G0024700.1.v1.484Phenylpropanoid · CAD
Smil00G0029680.1.v1.484Phenylpropanoid · CAD
Smil00G0037580.1.v1.484Phenylpropanoid · CAD
Smil00G0037600.1.v1.484Phenylpropanoid · CAD
Smil00G0037780.1.v1.484Phenylpropanoid · CAD
Smil00G0037790.1.v1.484Phenylpropanoid · CAD
Smil00G0043450.1.v1.484Phenylpropanoid · CAD
Smil01G0003400.1.v1.484Phenylpropanoid · CAD
Smil01G0003890.1.v1.484Phenylpropanoid · CAD
Smil01G0012200.1.v1.484Phenylpropanoid · CAD
Smil01G0021340.1.v1.484Phenylpropanoid · CAD
Smil02G0002570.1.v1.484Phenylpropanoid · CAD
Smil02G0002580.1.v1.484Phenylpropanoid · CAD
Smil02G0020760.1.v1.484Phenylpropanoid · CAD
Smil02G0031490.1.v1.484Phenylpropanoid · CAD
Smil03G0026570.1.v1.484Phenylpropanoid · CAD
Smil03G0026650.1.v1.484Phenylpropanoid · CAD
Smil03G0026930.1.v1.484Phenylpropanoid · CAD
Smil03G0033990.1.v1.484Phenylpropanoid · CAD
Smil03G0037730.1.v1.484Phenylpropanoid · CAD
Smil03G0037750.1.v1.484Phenylpropanoid · CAD
Smil03G0037800.1.v1.484Phenylpropanoid · CAD
Smil03G0037810.1.v1.484Phenylpropanoid · CAD
Smil04G0006470.1.v1.484Phenylpropanoid · CAD
Smil04G0013280.1.v1.484Phenylpropanoid · CAD
Smil04G0025340.1.v1.484Phenylpropanoid · CAD
Smil04G0025360.1.v1.484Phenylpropanoid · CAD
Smil04G0025880.1.v1.484Phenylpropanoid · CAD
Smil04G0025890.1.v1.484Phenylpropanoid · CAD
Smil04G0025900.1.v1.484Phenylpropanoid · CAD
Smil04G0025910.1.v1.484Phenylpropanoid · CAD
Smil05G0000850.1.v1.484Phenylpropanoid · CAD
Smil05G0000870.1.v1.484Phenylpropanoid · CAD

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.