Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil05G0002000.1.v1.484Phenylpropanoid · CCR
Smil05G0003850.1.v1.484Phenylpropanoid · CCR
Smil05G0017970.1.v1.484Phenylpropanoid · CCR
Smil05G0021520.1.v1.484Phenylpropanoid · CCR
Smil05G0022700.1.v1.484Phenylpropanoid · CCR
Smil05G0028830.1.v1.484Phenylpropanoid · CCR
Smil05G0030430.1.v1.484Phenylpropanoid · CCR
Smil06G0001010.1.v1.484Phenylpropanoid · CCR
Smil06G0009820.1.v1.484Phenylpropanoid · CCR
Smil06G0028050.1.v1.484Phenylpropanoid · CCR
Smil06G0028130.1.v1.484Phenylpropanoid · CCR
Smil06G0028580.1.v1.484Phenylpropanoid · CCR
Smil07G0001100.1.v1.484Phenylpropanoid · CCR
Smil07G0016580.1.v1.484Phenylpropanoid · CCR
SmilGWHAOSJ000000700000320.1.v1.484Phenylpropanoid · CCR
SmilGWHAOSJ000002420002120.1.v1.484Phenylpropanoid · CCR
Smil00G0039520.1.v1.484Phenylpropanoid · CCoAOMT
Smil01G0004130.1.v1.484Phenylpropanoid · CCoAOMT
Smil01G0019780.1.v1.484Phenylpropanoid · CCoAOMT
Smil01G0019790.1.v1.484Phenylpropanoid · CCoAOMT
Smil01G0019800.1.v1.484Phenylpropanoid · CCoAOMT
Smil02G0010160.1.v1.484Phenylpropanoid · CCoAOMT
Smil03G0010530.1.v1.484Phenylpropanoid · CCoAOMT
Smil03G0010540.1.v1.484Phenylpropanoid · CCoAOMT
Smil03G0010550.1.v1.484Phenylpropanoid · CCoAOMT
Smil03G0010560.1.v1.484Phenylpropanoid · CCoAOMT
Smil03G0016730.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0011810.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0011820.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0011830.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0011840.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0011850.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0011860.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0011880.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0011890.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0011910.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0011920.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0017620.1.v1.484Phenylpropanoid · CCoAOMT
Smil04G0017630.1.v1.484Phenylpropanoid · CCoAOMT
Smil05G0022460.1.v1.484Phenylpropanoid · CCoAOMT
Smil05G0030680.1.v1.484Phenylpropanoid · CCoAOMT
Smil06G0002300.1.v1.484Phenylpropanoid · CCoAOMT
Smil06G0002330.1.v1.484Phenylpropanoid · CCoAOMT
Smil06G0020050.1.v1.484Phenylpropanoid · CCoAOMT
Smil07G0007610.1.v1.484Phenylpropanoid · CCoAOMT
Smil07G0007620.1.v1.484Phenylpropanoid · CCoAOMT
Smil07G0007640.1.v1.484Phenylpropanoid · CCoAOMT
Smil07G0019610.1.v1.484Phenylpropanoid · CCoAOMT
Smil07G0019620.1.v1.484Phenylpropanoid · CCoAOMT
Smil00G0010020.1.v1.484Phenylpropanoid · COMT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.