Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil00G0030470.1.v1.484Phenylpropanoid · COMT
Smil01G0001100.1.v1.484Phenylpropanoid · COMT
Smil01G0013950.1.v1.484Phenylpropanoid · COMT
Smil01G0015220.1.v1.484Phenylpropanoid · COMT
Smil02G0010740.1.v1.484Phenylpropanoid · COMT
Smil02G0010750.1.v1.484Phenylpropanoid · COMT
Smil02G0010770.1.v1.484Phenylpropanoid · COMT
Smil02G0013680.1.v1.484Phenylpropanoid · COMT
Smil02G0013750.1.v1.484Phenylpropanoid · COMT
Smil03G0011820.1.v1.484Phenylpropanoid · COMT
Smil03G0011830.1.v1.484Phenylpropanoid · COMT
Smil03G0011840.1.v1.484Phenylpropanoid · COMT
Smil03G0011850.1.v1.484Phenylpropanoid · COMT
Smil03G0011900.1.v1.484Phenylpropanoid · COMT
Smil03G0011910.1.v1.484Phenylpropanoid · COMT
Smil03G0011920.1.v1.484Phenylpropanoid · COMT
Smil03G0029220.1.v1.484Phenylpropanoid · COMT
Smil03G0029230.1.v1.484Phenylpropanoid · COMT
Smil04G0015620.1.v1.484Phenylpropanoid · COMT
Smil04G0015630.1.v1.484Phenylpropanoid · COMT
Smil04G0015640.1.v1.484Phenylpropanoid · COMT
Smil05G0032240.1.v1.484Phenylpropanoid · COMT
Smil06G0030130.1.v1.484Phenylpropanoid · COMT
Smil07G0006330.1.v1.484Phenylpropanoid · COMT
Smil00G0000110.1.v1.484Phenylpropanoid · CSE
Smil00G0019980.1.v1.484Phenylpropanoid · CSE
Smil00G0021210.1.v1.484Phenylpropanoid · CSE
Smil00G0026610.1.v1.484Phenylpropanoid · CSE
Smil00G0028520.1.v1.484Phenylpropanoid · CSE
Smil00G0032440.1.v1.484Phenylpropanoid · CSE
Smil00G0039400.1.v1.484Phenylpropanoid · CSE
Smil00G0041420.1.v1.484Phenylpropanoid · CSE
Smil01G0001980.1.v1.484Phenylpropanoid · CSE
Smil01G0003440.1.v1.484Phenylpropanoid · CSE
Smil01G0006090.1.v1.484Phenylpropanoid · CSE
Smil01G0006630.1.v1.484Phenylpropanoid · CSE
Smil02G0006230.1.v1.484Phenylpropanoid · CSE
Smil02G0018120.1.v1.484Phenylpropanoid · CSE
Smil02G0028600.1.v1.484Phenylpropanoid · CSE
Smil03G0004020.1.v1.484Phenylpropanoid · CSE
Smil03G0013500.1.v1.484Phenylpropanoid · CSE
Smil03G0013510.1.v1.484Phenylpropanoid · CSE
Smil03G0013520.1.v1.484Phenylpropanoid · CSE
Smil03G0013540.1.v1.484Phenylpropanoid · CSE
Smil03G0013550.1.v1.484Phenylpropanoid · CSE
Smil03G0013580.1.v1.484Phenylpropanoid · CSE
Smil03G0013590.1.v1.484Phenylpropanoid · CSE
Smil03G0013610.1.v1.484Phenylpropanoid · CSE
Smil03G0023070.1.v1.484Phenylpropanoid · CSE
Smil03G0025180.1.v1.484Phenylpropanoid · CSE

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.