Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil02G0008440.1.v1.484Alkaloid · 8HGO
Smil02G0020040.1.v1.484Alkaloid · 8HGO
Smil02G0020760.1.v1.484Alkaloid · 8HGO
Smil02G0022530.1.v1.484Alkaloid · 8HGO
Smil02G0027240.1.v1.484Alkaloid · 8HGO
Smil03G0015410.1.v1.484Alkaloid · 8HGO
Smil03G0026640.1.v1.484Alkaloid · 8HGO
Smil03G0026650.1.v1.484Alkaloid · 8HGO
Smil04G0006470.1.v1.484Alkaloid · 8HGO
Smil04G0013280.1.v1.484Alkaloid · 8HGO
Smil04G0025380.1.v1.484Alkaloid · 8HGO
Smil05G0006820.1.v1.484Alkaloid · 8HGO
Smil05G0031710.1.v1.484Alkaloid · 8HGO
Smil05G0031720.1.v1.484Alkaloid · 8HGO
Smil06G0008780.1.v1.484Alkaloid · 8HGO
Smil06G0011440.1.v1.484Alkaloid · 8HGO
Smil07G0012540.1.v1.484Alkaloid · 8HGO
Smil07G0021620.1.v1.484Alkaloid · 8HGO
Smil07G0021630.1.v1.484Alkaloid · 8HGO
SmilGWHAOSJ000000670000250.1.v1.484Alkaloid · 8HGO
SmilGWHAOSJ000000790000520.1.v1.484Alkaloid · 8HGO
SmilGWHAOSJ000006110007990.1.v1.484Alkaloid · 8HGO
Smil00G0002360.1.v1.484Alkaloid · ADC
Smil02G0011360.1.v1.484Alkaloid · ADC
Smil03G0021700.1.v1.484Alkaloid · ADC
Smil06G0015020.1.v1.484Alkaloid · ADC
SmilGWHAOSJ000009070013920.1.v1.484Alkaloid · ADC
Smil03G0035310.1.v1.484Alkaloid · CNMT
Smil04G0019570.1.v1.484Alkaloid · CNMT
Smil00G0013400.1.v1.484Alkaloid · CODM_T6ODM
Smil00G0014950.1.v1.484Alkaloid · CODM_T6ODM
Smil00G0035070.1.v1.484Alkaloid · CODM_T6ODM
Smil00G0042580.1.v1.484Alkaloid · CODM_T6ODM
Smil00G0044680.1.v1.484Alkaloid · CODM_T6ODM
Smil01G0004760.1.v1.484Alkaloid · CODM_T6ODM
Smil01G0015560.1.v1.484Alkaloid · CODM_T6ODM
Smil01G0027600.1.v1.484Alkaloid · CODM_T6ODM
Smil01G0027610.1.v1.484Alkaloid · CODM_T6ODM
Smil01G0030240.1.v1.484Alkaloid · CODM_T6ODM
Smil02G0011640.1.v1.484Alkaloid · CODM_T6ODM
Smil02G0016840.1.v1.484Alkaloid · CODM_T6ODM
Smil02G0016850.1.v1.484Alkaloid · CODM_T6ODM
Smil02G0027290.1.v1.484Alkaloid · CODM_T6ODM
Smil02G0030290.1.v1.484Alkaloid · CODM_T6ODM
Smil02G0033990.1.v1.484Alkaloid · CODM_T6ODM
Smil03G0010720.1.v1.484Alkaloid · CODM_T6ODM
Smil03G0020460.1.v1.484Alkaloid · CODM_T6ODM
Smil03G0024210.1.v1.484Alkaloid · CODM_T6ODM
Smil03G0025950.1.v1.484Alkaloid · CODM_T6ODM
Smil03G0025960.1.v1.484Alkaloid · CODM_T6ODM

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.