Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil04G0003190.1.v1.484Alkaloid · CODM_T6ODM
Smil04G0003520.1.v1.484Alkaloid · CODM_T6ODM
Smil04G0014380.1.v1.484Alkaloid · CODM_T6ODM
Smil04G0021470.1.v1.484Alkaloid · CODM_T6ODM
Smil04G0021910.1.v1.484Alkaloid · CODM_T6ODM
Smil04G0022490.1.v1.484Alkaloid · CODM_T6ODM
Smil04G0023370.1.v1.484Alkaloid · CODM_T6ODM
Smil05G0003650.1.v1.484Alkaloid · CODM_T6ODM
Smil05G0015300.1.v1.484Alkaloid · CODM_T6ODM
Smil05G0015430.1.v1.484Alkaloid · CODM_T6ODM
Smil05G0015450.1.v1.484Alkaloid · CODM_T6ODM
Smil05G0016440.1.v1.484Alkaloid · CODM_T6ODM
Smil06G0000470.1.v1.484Alkaloid · CODM_T6ODM
Smil06G0003120.1.v1.484Alkaloid · CODM_T6ODM
Smil06G0003160.1.v1.484Alkaloid · CODM_T6ODM
Smil06G0009020.1.v1.484Alkaloid · CODM_T6ODM
Smil06G0021200.1.v1.484Alkaloid · CODM_T6ODM
Smil06G0021240.1.v1.484Alkaloid · CODM_T6ODM
Smil06G0028350.1.v1.484Alkaloid · CODM_T6ODM
Smil07G0000010.1.v1.484Alkaloid · CODM_T6ODM
Smil07G0005380.1.v1.484Alkaloid · CODM_T6ODM
Smil07G0008750.1.v1.484Alkaloid · CODM_T6ODM
Smil07G0012110.1.v1.484Alkaloid · CODM_T6ODM
Smil07G0017180.1.v1.484Alkaloid · CODM_T6ODM
SmilGWHAOSJ000000970000150.1.v1.484Alkaloid · CODM_T6ODM
SmilGWHAOSJ000002640002370.1.v1.484Alkaloid · CODM_T6ODM
SmilGWHAOSJ000003110003100.1.v1.484Alkaloid · CODM_T6ODM
SmilGWHAOSJ000003110003110.1.v1.484Alkaloid · CODM_T6ODM
SmilGWHAOSJ000005460007130.1.v1.484Alkaloid · CODM_T6ODM
Smil00G0010980.1.v1.484Alkaloid · COR
Smil00G0015130.1.v1.484Alkaloid · COR
Smil00G0023440.1.v1.484Alkaloid · COR
Smil00G0023450.1.v1.484Alkaloid · COR
Smil00G0027850.1.v1.484Alkaloid · COR
Smil00G0044410.1.v1.484Alkaloid · COR
Smil01G0007410.1.v1.484Alkaloid · COR
Smil02G0008930.1.v1.484Alkaloid · COR
Smil02G0012400.1.v1.484Alkaloid · COR
Smil02G0012670.1.v1.484Alkaloid · COR
Smil02G0013220.1.v1.484Alkaloid · COR
Smil02G0022380.1.v1.484Alkaloid · COR
Smil03G0038680.1.v1.484Alkaloid · COR
Smil03G0038690.1.v1.484Alkaloid · COR
Smil04G0009110.1.v1.484Alkaloid · COR
Smil04G0012290.1.v1.484Alkaloid · COR
Smil04G0016120.1.v1.484Alkaloid · COR
Smil04G0019820.1.v1.484Alkaloid · COR
Smil06G0005320.1.v1.484Alkaloid · COR
Smil06G0005330.1.v1.484Alkaloid · COR
Smil06G0005340.1.v1.484Alkaloid · COR

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.