LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

Pathway profileCandidate records
Reset
Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil00G0010520.1.v1.484Phenylpropanoid · POD
Smil00G0014620.1.v1.484Phenylpropanoid · POD
Smil00G0018140.1.v1.484Phenylpropanoid · POD
Smil00G0020330.1.v1.484Phenylpropanoid · POD
Smil00G0021500.1.v1.484Phenylpropanoid · POD
Smil00G0021510.1.v1.484Phenylpropanoid · POD
Smil00G0041400.1.v1.484Phenylpropanoid · POD
Smil00G0041410.1.v1.484Phenylpropanoid · POD
Smil02G0003130.1.v1.484Phenylpropanoid · POD
Smil02G0011200.1.v1.484Phenylpropanoid · POD
Smil02G0013970.1.v1.484Phenylpropanoid · POD
Smil02G0014330.1.v1.484Phenylpropanoid · POD
Smil02G0021460.1.v1.484Phenylpropanoid · POD
Smil02G0024530.1.v1.484Phenylpropanoid · POD
Smil02G0028120.1.v1.484Phenylpropanoid · POD
Smil02G0028130.1.v1.484Phenylpropanoid · POD
Smil02G0028140.1.v1.484Phenylpropanoid · POD
Smil02G0029650.1.v1.484Phenylpropanoid · POD
Smil03G0007220.1.v1.484Phenylpropanoid · POD
Smil03G0019590.1.v1.484Phenylpropanoid · POD
Smil03G0021360.1.v1.484Phenylpropanoid · POD
Smil03G0021370.1.v1.484Phenylpropanoid · POD
Smil03G0022610.1.v1.484Phenylpropanoid · POD
Smil03G0038270.1.v1.484Phenylpropanoid · POD
Smil03G0039020.1.v1.484Phenylpropanoid · POD
Smil04G0002970.1.v1.484Phenylpropanoid · POD
Smil04G0009720.1.v1.484Phenylpropanoid · POD
Smil04G0023910.1.v1.484Phenylpropanoid · POD
Smil04G0029540.1.v1.484Phenylpropanoid · POD
Smil05G0020170.1.v1.484Phenylpropanoid · POD
Smil05G0021260.1.v1.484Phenylpropanoid · POD
Smil05G0021280.1.v1.484Phenylpropanoid · POD
Smil05G0024420.1.v1.484Phenylpropanoid · POD
Smil05G0030670.1.v1.484Phenylpropanoid · POD
Smil06G0003980.1.v1.484Phenylpropanoid · POD
Smil06G0011710.1.v1.484Phenylpropanoid · POD
Smil06G0015590.1.v1.484Phenylpropanoid · POD
Smil06G0020990.1.v1.484Phenylpropanoid · POD
Smil06G0023140.1.v1.484Phenylpropanoid · POD
Smil06G0023170.1.v1.484Phenylpropanoid · POD
Smil07G0003460.1.v1.484Phenylpropanoid · POD
Smil07G0005590.1.v1.484Phenylpropanoid · POD
SmilGWHAOSJ000004430005340.1.v1.484Phenylpropanoid · POD
SmilGWHAOSJ000006180008030.1.v1.484Phenylpropanoid · POD
Smil00G0040350.1.v1.484Steroid / sterol · BR6OX1_CYP85A1
Smil01G0003390.1.v1.484Steroid / sterol · BR6OX1_CYP85A1
Smil03G0012380.1.v1.484Steroid / sterol · BR6OX1_CYP85A1
Smil03G0038130.1.v1.484Steroid / sterol · BR6OX1_CYP85A1
Smil00G0016270.1.v1.484Steroid / sterol · CAS
Smil00G0016300.1.v1.484Steroid / sterol · CAS

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.